D-Index & Metrics Best Publications

D-Index & Metrics D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines.

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Genetics and Molecular Biology D-index 102 Citations 57,907 240 World Ranking 397 National Ranking 238

Research.com Recognitions

Awards & Achievements

2018 - Member of the National Academy of Sciences

1998 - Fellow of Alfred P. Sloan Foundation

Overview

What is he best known for?

The fields of study he is best known for:

  • Gene
  • Enzyme
  • DNA

His scientific interests lie mostly in Protein structure, MODELLER, Computational biology, Crystallography and Genetics. His Protein structure study combines topics in areas such as Structural biology, Peptide sequence, Biological system and Stereochemistry. His ModBase study, which is part of a larger body of work in MODELLER, is frequently linked to Model building, bridging the gap between disciplines.

Andrej Sali works mostly in the field of Computational biology, limiting it down to concerns involving Threading and, occasionally, Protein structure database and Structural alignment. Andrej Sali studied Crystallography and Protein folding that intersect with Levinthal's paradox. His work on Gene, Genome and Phylogenetics as part of general Genetics study is frequently connected to Proteobacteria, therefore bridging the gap between diverse disciplines of science and establishing a new relationship between them.

His most cited work include:

  • Comparative Protein Modelling by Satisfaction of Spatial Restraints (10270 citations)
  • Comparative Protein Structure Modeling Using MODELLER (3008 citations)
  • Comparative protein structure modeling of genes and genomes (2578 citations)

What are the main themes of his work throughout his whole career to date?

Protein structure, Computational biology, Biochemistry, Crystallography and Biophysics are his primary areas of study. The Protein structure study combines topics in areas such as MODELLER, Homology modeling and Binding site. His research integrates issues of Structural biology, Genetics, Function, Protein–protein interaction and Bioinformatics in his study of Computational biology.

The study of Crystallography is intertwined with the study of Biological system in a number of ways. His work in Biophysics addresses subjects such as Nuclear pore, which are connected to disciplines such as Saccharomyces cerevisiae. Andrej Sali is interested in Loop modeling, which is a field of Protein structure prediction.

He most often published in these fields:

  • Protein structure (26.56%)
  • Computational biology (22.74%)
  • Biochemistry (18.71%)

What were the highlights of his more recent work (between 2015-2021)?

  • Cell biology (9.26%)
  • Biophysics (12.47%)
  • Computational biology (22.74%)

In recent papers he was focusing on the following fields of study:

Andrej Sali focuses on Cell biology, Biophysics, Computational biology, Nuclear pore and Structural biology. In Computational biology, Andrej Sali works on issues like DNA replication, which are connected to Budding yeast. His Nuclear pore research is multidisciplinary, incorporating perspectives in Structure, Nucleoporin and Nucleocytoplasmic Transport.

His Structural biology research also works with subjects such as

  • Data mining that connect with fields like Consistency and Protein Data Bank,
  • Structure which connect with Data type, Function and Data science. His study explores the link between Protein domain and topics such as Plasma protein binding that cross with problems in Protein structure. His research integrates issues of Crystallography and Transporter in his study of Protein structure.

Between 2015 and 2021, his most popular works were:

  • A SARS-CoV-2 protein interaction map reveals targets for drug repurposing. (1317 citations)
  • FoXS, FoXSDock and MultiFoXS: Single-state and multi-state structural modeling of proteins and their complexes based on SAXS profiles (222 citations)
  • Integrative structure and functional anatomy of a nuclear pore complex (213 citations)

In his most recent research, the most cited papers focused on:

  • Gene
  • Enzyme
  • DNA

Andrej Sali mainly focuses on Cell biology, Biophysics, Nuclear pore, Structural biology and Proteasome. His Nuclear pore study incorporates themes from Transport protein, Nucleocytoplasmic Transport and Nucleoporin. His study in Transport protein is interdisciplinary in nature, drawing from both MODELLER, Cadherin, Cell adhesion and Structure.

His studies in Protein domain integrate themes in fields like Protein structure, Dodecameric protein, Protein subunit and Helicase. His Conformational change research is multidisciplinary, incorporating elements of Computational biology and Docking. The various areas that Andrej Sali examines in his Computational biology study include Proteome, Data mining, Macromolecular docking, CASP and Homology modeling.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

Comparative Protein Modelling by Satisfaction of Spatial Restraints

Andrej Šali;Tom L. Blundell.
Journal of Molecular Biology (1993)

13222 Citations

Comparative protein structure modeling using Modeller.

Narayanan Eswar;Ben Webb;Marc A. Marti‐Renom;M.S. Madhusudhan.
Current protocols in human genetics (2006)

4192 Citations

Comparative protein structure modeling of genes and genomes

Marc A. Martí-Renom;Ashley C. Stuart;András Fiser;Roberto Sánchez.
Annual Review of Biophysics and Biomolecular Structure (2000)

3567 Citations

Protein structure modeling with MODELLER.

Narayanan Eswar;David Eramian;Ben Webb;Min-Yi Shen.
Methods of Molecular Biology (2008)

3130 Citations

Modeling of loops in protein structures.

András Fiser;Richard Kinh Gian Do;Andrej Šali.
Protein Science (2000)

2287 Citations

Statistical potential for assessment and prediction of protein structures

Min-yi Shen;Andrej Sali.
Protein Science (2006)

2093 Citations

Protein Structure Prediction and Structural Genomics

David Baker;Andrej Sali.
Science (2001)

2069 Citations

Modeller: generation and refinement of homology-based protein structure models.

András Fiser;Andrej Šali.
Methods in Enzymology (2003)

1622 Citations

Evaluation of comparative protein modeling by MODELLER.

A. Sali;L. Potterton;Feng Yuan;H. Van Vlijmen.
Proteins (1995)

1228 Citations

How does a protein fold

Andrej Šali;Eugene Shakhnovich;Martin Karplus.
Nature (1994)

1193 Citations

Editorial Boards

Structure
(Impact Factor: 5.871)

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