D-Index & Metrics Best Publications

D-Index & Metrics

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Chemistry D-index 67 Citations 15,099 204 World Ranking 3126 National Ranking 5

Research.com Recognitions

Awards & Achievements

2009 - Prize of the Foundation for Polish Science - Nagroda Fundacji na rzecz Nauki Polskiej for development and practical application of unique methods for protein structure prediction

Overview

What is he best known for?

The fields of study he is best known for:

  • Quantum mechanics
  • Enzyme
  • DNA

Andrzej Kolinski spends much of his time researching Protein folding, Crystallography, Protein structure, Protein structure prediction and Globular protein. Andrzej Kolinski combines subjects such as Crambin, Biological system, Protein secondary structure and Thermodynamics with his study of Protein folding. Andrzej Kolinski has included themes like Basis, Side chain and Evolutionary information in his Crystallography study.

His Protein structure research is multidisciplinary, incorporating elements of Computational chemistry and Force field. His Protein structure prediction research incorporates elements of Algorithm, Ab initio and Threading. Andrzej Kolinski works mostly in the field of Globular protein, limiting it down to concerns involving Protein tertiary structure and, occasionally, Myoglobin.

His most cited work include:

  • AAindex: amino acid index database, progress report 2008 (653 citations)
  • Coarse-Grained Protein Models and Their Applications (337 citations)
  • Topology fingerprint approach to the inverse protein folding problem. (324 citations)

What are the main themes of his work throughout his whole career to date?

His primary scientific interests are in Protein structure, Protein folding, Crystallography, Protein structure prediction and Statistical physics. The various areas that Andrzej Kolinski examines in his Protein structure study include Computational chemistry, Force field, Docking, Molecular dynamics and Biological system. His Protein folding study also includes fields such as

  • Protein tertiary structure most often made with reference to Protein secondary structure,
  • Globular protein which intersects with area such as Chemical physics.

His studies in Crystallography integrate themes in fields like Molten globule, Leucine zipper and Folding funnel. His Protein structure prediction research is multidisciplinary, relying on both Algorithm, Ab initio, Data mining and Threading. His Statistical physics study also includes

  • Molecule most often made with reference to Lattice,
  • Polymer which is related to area like Thermodynamics.

He most often published in these fields:

  • Protein structure (40.28%)
  • Protein folding (46.39%)
  • Crystallography (37.78%)

What were the highlights of his more recent work (between 2012-2021)?

  • Protein structure (40.28%)
  • Molecular dynamics (14.17%)
  • Docking (8.89%)

In recent papers he was focusing on the following fields of study:

The scientist’s investigation covers issues in Protein structure, Molecular dynamics, Docking, Biological system and Protein folding. His study in Protein structure is interdisciplinary in nature, drawing from both Globular protein, Force field and Multiscale modeling. Within one scientific family, Andrzej Kolinski focuses on topics pertaining to Computational science under Globular protein, and may sometimes address concerns connected to Software.

His research in Molecular dynamics intersects with topics in Chemical physics, Characterization, Nanotechnology and Native structure, Biochemistry. His studies in Biological system integrate themes in fields like Protein dynamics, Space and Membrane protein. His biological study spans a wide range of topics, including Fibril, Protein aggregation and Protein secondary structure.

Between 2012 and 2021, his most popular works were:

  • Coarse-Grained Protein Models and Their Applications (337 citations)
  • CABS-dock web server for the flexible docking of peptides to proteins without prior knowledge of the binding site (212 citations)
  • Modeling of protein–peptide interactions using the CABS-dock web server for binding site search and flexible docking (102 citations)

In his most recent research, the most cited papers focused on:

  • Quantum mechanics
  • Enzyme
  • DNA

Andrzej Kolinski mostly deals with Protein structure, Molecular dynamics, Molecular Docking Simulation, Docking and Protein folding. His study in Protein structure is interdisciplinary in nature, drawing from both Software and Bioinformatics. In his study, Space is strongly linked to Biological system, which falls under the umbrella field of Molecular dynamics.

His work carried out in the field of Protein folding brings together such families of science as Protein secondary structure, Fibril, Multiscale modeling, Globular protein and Algorithm. His Globular protein research integrates issues from Chemical physics, Ab initio, Folding and Sequence. His Theoretical computer science study which covers Protein structure prediction that intersects with The Internet.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

AAindex: amino acid index database, progress report 2008

Shuichi Kawashima;Piotr Pokarowski;Maria Pokarowska;Andrzej Kolinski.
Nucleic Acids Research (2007)

878 Citations

Coarse-Grained Protein Models and Their Applications

Sebastian Kmiecik;Dominik Gront;Michal Kolinski;Lukasz Wieteska.
Chemical Reviews (2016)

499 Citations

Topology fingerprint approach to the inverse protein folding problem.

Adam Godzik;Andrzej Kolinski;Andrzej Kolinski;Jeffrey Skolnick.
Journal of Molecular Biology (1992)

480 Citations

Monte carlo simulations of protein folding. I. Lattice model and interaction scheme

Andrzej Kolinski;Andrzej Kolinski;Jeffrey Skolnick.
Proteins (1994)

384 Citations

Simulations of the folding of a globular protein

Jeffrey Skolnick;Andrzej Kolinski.
Science (1990)

383 Citations

Protein modeling and structure prediction with a reduced representation.

Andrzej Kolinski.
Acta Biochimica Polonica (2004)

315 Citations

TOUCHSTONE II: a new approach to ab initio protein structure prediction.

Yang Zhang;Andrzej Kolinski;Andrzej Kolinski;Jeffrey Skolnick.
Biophysical Journal (2003)

304 Citations

MONSSTER: a method for folding globular proteins with a small number of distance restraints

Jeffrey Skolnick;Andrzej Kolinski;Andrzej Kolinski;Angel R. Ortiz.
Journal of Molecular Biology (1997)

301 Citations

Structural Genomics and Its Importance for Gene Function Analysis

Jeffrey Skolnick;Jacquelyn S. Fetrow;Andrzej Kolinski.
Nature Biotechnology (2000)

278 Citations

Derivation and testing of pair potentials for protein folding. When is the quasichemical approximation correct

Jeffrey Skolnick;Lukasz Jaroszewski;Andrzej Kolinski;Adam Godzik.
Protein Science (1997)

261 Citations

Best Scientists Citing Andrzej Kolinski

Adam Liwo

Adam Liwo

University of Gdańsk

Publications: 110

Jeffrey Skolnick

Jeffrey Skolnick

Georgia Institute of Technology

Publications: 96

Harold A. Scheraga

Harold A. Scheraga

Cornell University

Publications: 86

Yang Zhang

Yang Zhang

University of Michigan–Ann Arbor

Publications: 73

Janusz M. Bujnicki

Janusz M. Bujnicki

United Way

Publications: 62

Charles L. Brooks

Charles L. Brooks

University of Michigan–Ann Arbor

Publications: 44

Robert L. Jernigan

Robert L. Jernigan

Iowa State University

Publications: 43

Yaoqi Zhou

Yaoqi Zhou

Griffith University

Publications: 40

Eugene I. Shakhnovich

Eugene I. Shakhnovich

Harvard University

Publications: 36

Michael Levitt

Michael Levitt

Stanford University

Publications: 34

Adam Godzik

Adam Godzik

University of California, Riverside

Publications: 32

Hue Sun Chan

Hue Sun Chan

University of Toronto

Publications: 29

Michael Feig

Michael Feig

Michigan State University

Publications: 29

Andrej Sali

Andrej Sali

University of California, San Francisco

Publications: 27

Jiangning Song

Jiangning Song

Monash University

Publications: 27

José N. Onuchic

José N. Onuchic

Rice University

Publications: 27

Profile was last updated on December 6th, 2021.
Research.com Ranking is based on data retrieved from the Microsoft Academic Graph (MAG).
The ranking d-index is inferred from publications deemed to belong to the considered discipline.

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