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Janusz M. Bujnicki

Janusz M. Bujnicki

D-Index & Metrics

Genetics

D-Index
87
Citations
26760
World Ranking
1214
National Ranking
577

Research.com Recognitions

  • 2018 - Member of Academia Europaea
  • 2016 - Polish Academy of Science

Overview

Janusz M. Bujnicki is affiliated with United Way in the United States and has contributed extensively to the fields of biochemistry, genetics, and molecular biology. Their research publications focus primarily on molecular biology, with numerous works also relating to ecology, materials chemistry, computational theory and mathematics, and immunology.

The scientist's work covers several main topics including:

  • RNA and protein synthesis mechanisms
  • RNA modifications and cancer
  • RNA research and splicing
  • Bacteriophages and microbial interactions
  • Computational drug discovery methods
  • DNA and nucleic acid chemistry
  • Advanced biosensing and bioanalysis techniques

Frequent coauthors collaborating with Janusz M. Bujnicki include:

  • Filip Stefaniak
  • Sunandan Mukherjee
  • Eugene F. Baulin
  • Chandran Nithin
  • Natalia A. Szulc

The scientist has published across various notable venues, with the following being the most frequent:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Nucleic Acids Research
  • Faculty Opinions - Post-Publication Peer Review of the Biomedical Literature
  • Zenodo (CERN European Organization for Nuclear Research)
  • Proteins Structure Function and Bioinformatics

Significant papers authored or coauthored by Janusz M. Bujnicki include:

  • MODOMICS: a database of RNA modification pathways. 2021 update, 2021, Nucleic Acids Research
  • MODOMICS: a database of RNA modifications and related information. 2023 update, 2023, Nucleic Acids Research
  • Genome-wide mapping of SARS-CoV-2 RNA structures identifies therapeutically-relevant elements, 2020, Nucleic Acids Research
  • RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers, 2020, RNA
  • AnnapuRNA: A scoring function for predicting RNA-small molecule binding poses, 2021, PLoS Computational Biology

The scientist has received recognition in the form of appointments to learned societies:

  • Member of Academia Europaea, 2018
  • Polish Academy of Science, 2016

Best Publications

  • MODOMICS: a database of RNA modification pathways. 2017 update.

    Boccaletto P;Machnicka Ma;Machnicka Ma;Purta E;Piatkowski P

  • MODOMICS: a database of RNA modification pathways—2013 update

    Magdalena A. Machnicka;Kaja Milanowska;Okan Osman Oglou;Elzbieta Purta

  • Transcriptome Profile of Human Colorectal Adenomas

    Jacob Sabates-Bellver;Laurens G Van der Flier;Mariagrazia de Palo;Elisa Cattaneo

  • GeneSilico protein structure prediction meta-server

    Michal A. Kurowski;Janusz M. Bujnicki

  • Pcons: a neural-network-based consensus predictor that improves fold recognition.

    Jesper Lundström;Leszek Rychlewski;Janusz Bujnicki;Arne Elofsson

  • MetaDisorder: a meta-server for the prediction of intrinsic disorder in proteins

    Lukasz P Kozlowski;Janusz M Bujnicki

  • SimRNA: a coarse-grained method for RNA folding simulations and 3D structure prediction

    Michal J. Boniecki;Grzegorz Lach;Wayne K. Dawson;Konrad Tomala

  • MODOMICS: a database of RNA modification pathways

    Stanislaw Dunin-Horkawicz;Anna Czerwoniec;Michal J. Gajda;Marcin Feder

  • RNAcentral: a hub of information for non-coding RNA sequences

    Blake A Sweeney;Anton I Petrov;Boris Burkov

  • IAPs contain an evolutionarily conserved ubiquitin-binding domain that regulates NF-kappaB as well as cell survival and oncogenesis.

    Mads Gyrd-Hansen;Maurice Darding;Maria Miasari;Massimo M. Santoro;Massimo M. Santoro

  • RNAcentral: a comprehensive database of non-coding RNA sequences.

    Anton I. Petrov;Simon J E Kay;Ioanna Kalvari;Kevin L. Howe

  • RNA-Puzzles: A CASP-like evaluation of RNA three-dimensional structure prediction

    José Almeida Cruz;Marc Frédérick Blanchet;Michal Boniecki;Janusz M. Bujnicki;Janusz M. Bujnicki

  • The YTH domain is a novel RNA binding domain.

    Zhaiyi Zhang;Dominik Theler;Katarzyna H. Kaminska;Katarzyna H. Kaminska;Michael Hiller

  • ModeRNA: a tool for comparative modeling of RNA 3D structure

    Magdalena Rother;Kristian Rother;Tomasz Puton;Janusz M. Bujnicki

  • Structure prediction meta server

    Janusz M. Bujnicki;Arne Elofsson;Daniel Fischer;Leszek Rychlewski

  • Structure prediction and phylogenetic analysis of a functionally diverse family of proteins homologous to the MT-A70 subunit of the human mRNA:m(6)A methyltransferase.

    Janusz M. Bujnicki;Marcin Feder;Monika Radlinska;Robert M. Blumenthal

  • MODOMICS: a database of RNA modification pathways. 2008 update

    Anna Czerwoniec;Stanislaw Dunin-Horkawicz;Elzbieta Purta;Katarzyna H. Kaminska

  • Genome-wide mapping of SARS-CoV-2 RNA structures identifies therapeutically-relevant elements.

    Ilaria Manfredonia;Chandran Nithin;Almudena Ponce-Salvatierra;Pritha Ghosh

  • Phylogenomic identification of five new human homologs of the DNA repair enzyme AlkB

    Michal A Kurowski;Ashok S Bhagwat;Grzegorz Papaj;Janusz M Bujnicki

  • NPDock: a web server for protein–nucleic acid docking

    Irina Tuszynska;Marcin Magnus;Katarzyna Jonak;Wayne Dawson

Frequent Co-Authors

Leszek Rychlewski
Leszek Rychlewski BioInfoBank Institute
Henri Grosjean
Henri Grosjean Centre national de la recherche scientifique, CNRS
Alfred Pingoud
Alfred Pingoud University of Giessen
Todd M. Lowe
Todd M. Lowe University of California, Santa Cruz
Rhiju Das
Rhiju Das Stanford University
Arne Elofsson
Arne Elofsson Science for Life Laboratory
Dmitri I. Svergun
Dmitri I. Svergun European Bioinformatics Institute
Eric Westhof
Eric Westhof University of Strasbourg
Robin R. Gutell
Robin R. Gutell The University of Texas at Austin
Elspeth A. Bruford
Elspeth A. Bruford University of Cambridge

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