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Genetics

D-Index
68
Citations
36956
World Ranking
2386
National Ranking
1073

Overview

Matthew T. Weirauch is affiliated with Cincinnati Children's Hospital Medical Center in the United States. Their research spans the fields of Biochemistry, Genetics and Molecular Biology, and Medicine, with a significant number of publications in related subfields.

The scientist's main subfields of study include Molecular Biology, Immunology, Rheumatology, Cancer Research, and Genetics. Their work focuses on key topics such as RNA Research and Splicing, RNA modifications and cancer, Genomics and Chromatin Dynamics, interferon and immune responses, Systemic Lupus Erythematosus Research, Immune Cell Function and Interaction, and T-cell and B-cell Immunology.

Recent publications by Matthew T. Weirauch illustrate a diverse range of molecular and immunological research:

  • Single-nucleus RNA-seq identifies transcriptional heterogeneity in multinucleated skeletal myofibers, 2020, Nature Communications
  • Gene-environment interactions and their impact on human health, 2022, Genes and Immunity
  • Meta-analysis of 208370 East Asians identifies 113 susceptibility loci for systemic lupus erythematosus, 2020, Annals of the Rheumatic Diseases
  • PKM2-dependent metabolic skewing of hepatic Th17 cells regulates pathogenesis of non-alcoholic fatty liver disease, 2021, Cell Metabolism
  • TOP1 inhibition therapy protects against SARS-CoV-2-induced lethal inflammation, 2021, Cell

Matthew T. Weirauch has collaborated frequently with several researchers, as reflected in co-authorship counts. The most frequent co-authors include Leah C. Kottyan, Sreeja Parameswaran, Xiaoting Chen, Omer Donmez, and Carmy Forney.

Their work has been published extensively in several venues, with notable numbers of publications in:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Nature Communications
  • Journal of Allergy and Clinical Immunology
  • The Journal of Immunology
  • BMC Biology

Best Publications

  • Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

    Ewan Birney;John A. Stamatoyannopoulos;Anindya Dutta;Roderic Guigó

  • Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning

    Babak Alipanahi;Andrew Delong;Matthew T Weirauch;Brendan J Frey

  • The Human Transcription Factors.

    Samuel A. Lambert;Arttu Jolma;Laura F. Campitelli;Pratyush K. Das

  • The genetic landscape of a cell.

    Michael Costanzo;Anastasia Baryshnikova;Jeremy Bellay;Yungil Kim

  • Genome sequence of the Brown Norway rat yields insights into mammalian evolution

    Richard A. Gibbs;George M. Weinstock;Michael L. Metzker;Donna M. Muzny

  • The UCSC Genome Browser Database: update 2006

    A. S. Hinrichs;D. Karolchik;R. Baertsch;G. P. Barber

  • Determination and Inference of Eukaryotic Transcription Factor Sequence Specificity

    Matthew T. Weirauch;Matthew T. Weirauch;Ally Yang;Mihai Albu;Atina G. Cote

  • A compendium of RNA-binding motifs for decoding gene regulation

    Debashish Ray;Hilal Kazan;Kate B. Cook;Matthew T. Weirauch;Matthew T. Weirauch

  • Evaluation of methods for modeling transcription factor sequence specificity

    Matthew T Weirauch;Atina Cote;Raquel Norel;Matti Annala

  • Genetic Associations with Gestational Duration and Spontaneous Preterm Birth

    Ge Zhang;Bjarke Feenstra;Jonas Bacelis;Xueping Liu

  • Transcription factors operate across disease loci, with EBNA2 implicated in autoimmunity

    John B. Harley;Xiaoting Chen;Mario Pujato;Daniel Miller

  • Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis

    Katherine Noelani Chang;Shan Zhong;Matthew T. Weirauch;Gary Hon

  • C2H2 zinc finger proteins greatly expand the human regulatory lexicon

    Hamed S Najafabadi;Sanie Mnaimneh;Frank W Schmitges;Michael Garton

  • Genome-wide association analysis of eosinophilic esophagitis provides insight into the tissue specificity of this allergic disease

    Leah C Kottyan;Leah C Kottyan;Benjamin P Davis;Joseph D Sherrill;Kan Liu

  • Mapping and Dynamics of Regulatory DNA and Transcription Factor Networks in A. thaliana

    Alessandra M. Sullivan;Andrej Andrej A Arsovski;Janne Lempe;Kerry L. Bubb

  • Single-nucleus RNA-seq identifies transcriptional heterogeneity in multinucleated skeletal myofibers.

    Michael J. Petrany;Casey O. Swoboda;Chengyi Sun;Kashish Chetal

  • MultiPipMaker and supporting tools: alignments and analysis of multiple genomic DNA sequences

    Scott Schwartz;Laura Elnitski;Mei Li;Matthew Weirauch

  • Amphioxus functional genomics and the origins of vertebrate gene regulation

    Ferdinand Marlétaz;Ferdinand Marlétaz;Panos N. Firbas;Ignacio Maeso;Juan J. Tena

  • Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteins.

    Blair R. G. Gordon;Yifei Li;Atina Cote;Matthew T. Weirauch

  • Author response: Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis

    Katherine Noelani Chang;Shan Zhong;Matthew T Weirauch;Gary Hon

Frequent Co-Authors

John B. Harley
John B. Harley United States Department of Veterans Affairs
Timothy P. Hughes
Timothy P. Hughes South Australian Health and Medical Research Institute
Gurjit K. Khurana Hershey
Gurjit K. Khurana Hershey Cincinnati Children's Hospital Medical Center
Kenneth M. Kaufman
Kenneth M. Kaufman Cincinnati Children's Hospital Medical Center
Nathan Salomonis
Nathan Salomonis Cincinnati Children's Hospital Medical Center
Lisa J. Martin
Lisa J. Martin Cincinnati Children's Hospital Medical Center
Robert M. Waterhouse
Robert M. Waterhouse Swiss Institute of Bioinformatics
Hugh M. Robertson
Hugh M. Robertson University of Illinois at Urbana-Champaign
Marc E. Rothenberg
Marc E. Rothenberg Cincinnati Children's Hospital Medical Center
Richard A. Gibbs
Richard A. Gibbs Baylor College of Medicine

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