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Genetics
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2026

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Best Scientists

D-Index
207
Citations
191135
World Ranking
223
National Ranking
146

Genetics

D-Index
212
Citations
201748
World Ranking
18
National Ranking
12

Research.com Recognitions

  • 2026 - Research.com Genetics in United States Leader Award
  • 2025 - Research.com Best Scientists Award
  • 2025 - Research.com Genetics in United States Leader Award
  • 2024 - Research.com Genetics in United States Leader Award
  • 2024 - Research.com Genetics and Molecular Biology in United States Leader Award
  • 2023 - Research.com Genetics in United States Leader Award
  • 2015 - Fellow of the American Academy of Arts and Sciences
  • 2014 - Fellow of the American Association for the Advancement of Science (AAAS)

Overview

Michael Snyder is affiliated with Stanford University in the United States. Their research spans multiple domains within biochemistry, genetics, molecular biology, and medicine. The scientist has contributed extensively to both foundational and applied aspects of these disciplines, focusing on various subfields such as molecular biology, genetics, physiology, immunology, and neurology.

The main topics of Michael Snyder's research encompass:

  • Single-cell and spatial transcriptomics
  • Metabolomics and mass spectrometry studies
  • Gut microbiota and health
  • Epigenetics and DNA methylation
  • RNA modifications and cancer
  • RNA research and splicing
  • Adipose tissue and metabolism

They have published frequently in venues including ENCODE Datasets, bioRxiv (Cold Spring Harbor Laboratory), Nature Communications, Cell, and Cell Reports.

Selected recent papers highlight a range of research interests:

  • Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices, 2021, published in Nature Methods
  • Exerkines in health, resilience and disease, 2022, published in Nature Reviews Endocrinology
  • The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution, 2020, published in Cell
  • Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy, 2020, published in Cell
  • Biomarkers of aging for the identification and evaluation of longevity interventions, 2023, published in Cell

Michael Snyder's frequent collaborators include Kévin Contrepois, Sai Zhang, Xiaotao Shen, Johnathan Cooper-Knock, and Ahmed A. Metwally.

In recognition of their contributions to science, they have been awarded fellowships by the American Academy of Arts and Sciences in 2015 and the American Association for the Advancement of Science (AAAS) in 2014.

Best Publications

  • RNA-Seq: a revolutionary tool for transcriptomics

    Zhong Wang;Mark Gerstein;Michael Snyder

  • Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

    Ewan Birney;John A. Stamatoyannopoulos;Anindya Dutta;Roderic Guigó

  • The GTEx Consortium atlas of genetic regulatory effects across human tissues

    F Aguet;AN Barbeira;R Bonazzola;A Brown

  • Functional profiling of the Saccharomyces cerevisiae genome.

    Guri Giaever;Angela M. Chu;Li Ni;Carla Connelly

  • Functional Characterization of the S. cerevisiae Genome by Gene Deletion and Parallel Analysis

    Elizabeth A. Winzeler;Daniel D. Shoemaker;Anna Astromoff;Hong Liang

  • The ENCODE (ENCyclopedia of DNA elements) Project

    E. A. Feingold;P. J. Good;M. S. Guyer;S. Kamholz

  • The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

    Ugrappa Nagalakshmi;Zhong Wang;Karl Waern;Chong Shou

  • Global analysis of protein activities using proteome chips

    Michael Snyder;Heng Zhu;Paul Bertone;Scott M. Bidlingmaier

  • Annotation of functional variation in personal genomes using RegulomeDB

    Alan P. Boyle;Eurie L. Hong;Manoj Hariharan;Yong Cheng

  • An integrated encyclopedia of DNA elements in the human genome

    Ian Dunham;Anshul Kundaje;Shelley F. Aldred;Patrick J. Collins

  • Expanded encyclopaedias of DNA elements in the human and mouse genomes

    Jill E. Moore;Michael J. Purcaro;Henry E. Pratt;Charles B. Epstein

  • ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

    Stephen G. Landt;Georgi K. Marinov;Anshul Kundaje;Pouya Kheradpour

  • A comparative encyclopedia of DNA elements in the mouse genome

    Feng Yue;Feng Yue;Yong Cheng;Alessandra Breschi;Jeff Vierstra

  • Single-cell chromatin accessibility reveals principles of regulatory variation

    Jason D. Buenrostro;Beijing Wu;Ulrike M. Litzenburger;Dave Ruff

  • Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing

    Gordon Robertson;Martin Hirst;Matthew Bainbridge;Misha Bilenky

  • Architecture of the human regulatory network derived from ENCODE data

    Mark B Gerstein;Anshul Kundaje;Manoj Hariharan;Stephen G Landt

  • High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

    Haiyuan Yu;Pascal Braun;Muhammed A Yildirim;Irma Lemmens

  • CNVnator: An approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing

    Alexej Abyzov;Alexander Eckehart Urban;Michael Snyder;Mark Gerstein

  • A Bayesian networks approach for predicting protein-protein interactions from genomic data.

    Ronald Jansen;Haiyuan Yu;Dov Greenbaum;Yuval Kluger

  • Paired-end mapping reveals extensive structural variation in the human genome.

    Jan O. Korbel;Alexander Eckehart Urban;Jason P. Affourtit;Brian Godwin

Frequent Co-Authors

Mark Gerstein
Mark Gerstein Yale University
Joel Rozowsky
Joel Rozowsky Yale University
Sherman M. Weissman
Sherman M. Weissman Yale University
Anshul Kundaje
Anshul Kundaje Stanford University
Rui Chen
Rui Chen Capital Medical University
Joseph C. Wu
Joseph C. Wu Stanford University
Thomas R. Gingeras
Thomas R. Gingeras Cold Spring Harbor Laboratory
Paul Bertone
Paul Bertone University of Cambridge
Chao Cheng
Chao Cheng Baylor College of Medicine

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