His primary areas of investigation include Genetics, Gene, Human genome, Computational biology and Genome. His study in Genomics, Transcription, Polyadenylation, ENCODE and Transcriptome is done as part of Genetics. He usually deals with Polyadenylation and limits it to topics linked to Long non-coding RNA and Non-coding RNA.
Thomas R. Gingeras combines subjects such as GENCODE, DNase-Seq, Functional genomics and RNA-Seq with his study of ENCODE. The study incorporates disciplines such as Reference genome, Software, OS X, Polymorphic locus and Sequence annotation in addition to Computational biology. His Genome research includes themes of Chromatin and REDfly.
Thomas R. Gingeras focuses on Genetics, Gene, Computational biology, Genome and Molecular biology. His study in Human genome, RNA, Transcription, Transcriptome and Gene expression profiling falls within the category of Genetics. His work in Human genome is not limited to one particular discipline; it also encompasses Polyadenylation.
His Computational biology study combines topics in areas such as ENCODE, Alternative splicing, GENCODE, Genomics and Promoter. As a part of the same scientific study, Thomas R. Gingeras usually deals with the Genome, concentrating on Chromatin and frequently concerns with Transcriptional regulation. His studies in Molecular biology integrate themes in fields like Nucleic acid, Oligonucleotide, DNA, Endonuclease and Complementary DNA.
His main research concerns Genetics, Computational biology, Gene, RNA and Genome. His study involves Gene expression profiling, Human genome, Transcription, Intron and Drosophila melanogaster, a branch of Genetics. His Transcription research includes elements of Molecular biology and RNA polymerase II.
His work deals with themes such as Phenotype, Genomics, Chromatin, Promoter and Regulation of gene expression, which intersect with Computational biology. His RNA research is multidisciplinary, relying on both Candidate gene and Cell biology. His study in Genome is interdisciplinary in nature, drawing from both DNA binding site, ENCODE and DNA.
Thomas R. Gingeras mainly focuses on Genetics, Computational biology, Gene, Human genome and Genome. His study in Genetics focuses on Gene expression profiling, Chromatin, ENCODE, Gene expression and Promoter. The various areas that Thomas R. Gingeras examines in his ENCODE study include RNA-Seq and DNA.
Thomas R. Gingeras has included themes like Database, Whole genome sequencing, Long non-coding RNA, Regulation of gene expression and Unix in his Computational biology study. His Genome research is multidisciplinary, incorporating perspectives in Phenotype and DNA binding site. His study looks at the relationship between RNA and fields such as Transcriptome, as well as how they intersect with chemical problems.
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STAR: ultrafast universal RNA-seq aligner
Alexander Dobin;Carrie A. Davis;Felix Schlesinger;Jorg Drenkow.
Expression monitoring by hybridization to high density oligonucleotide arrays
David J. Lockhart;Eugene L. Brown;Gordon G. Wong;Mark S. Chee.
Nature Biotechnology (1996)
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Ewan Birney;John A. Stamatoyannopoulos;Anindya Dutta;Roderic Guigó.
The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression.
Thomas Derrien;Rory Johnson;Giovanni Bussotti;Andrea Tanzer.
Genome Research (2012)
Landscape of transcription in human cells
Sarah Djebali;Carrie A. Davis;Angelika Merkel;Alex Dobin.
An integrated encyclopedia of DNA elements in the human genome
Ian Dunham;Anshul Kundaje;Shelley F. Aldred;Patrick J. Collins.
The Transcriptional Landscape of the Mammalian Genome
P. Carninci;T. Kasukawa;S. Katayama;J. Gough.
High density synthetic oligonucleotide arrays
Robert J. Lipshutz;Stephen P.A. Fodor;Thomas R. Gingeras;David J. Lockhart.
Nature Genetics (1999)
CD127 expression inversely correlates with FoxP3 and suppressive function of human CD4+ T reg cells
Weihong Liu;Amy L Putnam;Zhou Xu-yu;Gregory L. Szot.
Journal of Experimental Medicine (2006)
The ENCODE (ENCyclopedia of DNA elements) Project
E. A. Feingold;P. J. Good;M. S. Guyer;S. Kamholz.
Profile was last updated on December 6th, 2021.
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