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Marian J. A. Groot Koerkamp

Marian J. A. Groot Koerkamp

D-Index & Metrics

Molecular Biology

D-Index
42
Citations
6555
World Ranking
3028
National Ranking
80

Overview

Marian J. A. Groot Koerkamp is affiliated with Utrecht University in the Netherlands. Their research spans multiple fields primarily focused on medicine and biochemistry, genetics, and molecular biology. The subfields of their work include molecular biology, pulmonary and respiratory medicine, oncology, cancer research, and pathology and forensic medicine.

The scientist has contributed to a diverse set of research topics, notably covering sarcoma diagnosis and treatment, CAR-T cell therapy research, cancer cells and metastasis, lymphoma diagnosis and treatment, cancer genomics and diagnostics, genomics and chromatin dynamics, and cellular transport and secretion.

Marian J. A. Groot Koerkamp has published papers in several prominent venues such as bioRxiv (Cold Spring Harbor Laboratory), Nature Communications, EMBO Molecular Medicine, The EMBO Journal, and Frontiers in Immunology. The venues with the most publications include bioRxiv with four papers and Nature Communications with two papers.

  • Mesenchymal tumor organoid models recapitulate rhabdomyosarcoma subtypes, 2022, EMBO Molecular Medicine
  • Single-cell transcriptomics reveals immune suppression and cell states predictive of patient outcomes in rhabdomyosarcoma, 2023, Nature Communications
  • Shortening of membrane lipid acyl chains compensates for phosphatidylcholine deficiency in choline-auxotroph yeast, 2021, The EMBO Journal
  • ErbB2 (HER2)-CAR-NK-92 cells for enhanced immunotherapy of metastatic fusion-driven alveolar rhabdomyosarcoma, 2023, Frontiers in Immunology
  • Infantile fibrosarcoma with an EGFR kinase domain duplication: Underlining a close relationship with congenital mesoblastic nephroma and highlighting a similar morphological spectrum, 2022, Annals of Diagnostic Pathology

Their frequent coauthors include:

  • Frank C. P. Holstege
  • Michael T. Meister
  • Mariël Brok
  • Laura S. Hiemcke-Jiwa
  • Jarno Drost

Best Publications

  • Dynamics of gene expression revealed by comparison of serial analysis of gene expression transcript profiles from yeast grown on two different carbon sources.

    Arnoud J. Kal;Anton Jan van Zonneveld;Vladimir Benes;Marlene van den Berg

  • Uterine Selection of Human Embryos at Implantation

    Jan J. Brosens;Madhuri S. Salker;Gijs Teklenburg;Jaya Nautiyal

  • Large-Scale Genetic Perturbations Reveal Regulatory Networks and an Abundance of Gene-Specific Repressors

    Patrick Kemmeren;Katrin Sameith;Loes A L. van de Pasch;Joris Joris J Benschop

  • Modulation of glutamine metabolism by the PI(3)K–PKB–FOXO network regulates autophagy

    Kristan E. van der Vos;Pernilla Eliasson;Tassula Proikas-Cezanne;Stephin J. Vervoort;Stephin J. Vervoort

  • The Specificity and Topology of Chromatin Interaction Pathways in Yeast

    Tineke L. Lenstra;Joris J. Benschop;Tae Soo Kim;Julia M. Schulze

  • Canonical Wnt signaling negatively modulates regulatory T cell function

    Jorg van Loosdregt;Veerle Fleskens;Machteld M. Tiemessen;Michal Mokry

  • The genomic landscape of compensatory evolution.

    Béla Szamecz;Gábor Boross;Dorottya Kalapis;Károly Kovács

  • Redox-sensitive cysteines bridge p300/CBP-mediated acetylation and FoxO4 activity

    Tobias B Dansen;Lydia M M Smits;Miranda H van Triest;Peter L J de Keizer

  • Genome-wide location of the coactivator mediator: Binding without activation and transient Cdk8 interaction on DNA.

    Jean-Christophe Andrau;Loes van de Pasch;Philip Lijnzaad;Theo Bijma

  • An endometrial gene expression signature accurately predicts recurrent implantation failure after IVF

    Yvonne E. M. Koot;Sander R. van Hooff;Carolien M. Boomsma;Dik van Leenen

  • Balancing of histone H3K4 methylation states by the Kdm5c/SMCX histone demethylase modulates promoter and enhancer function.

    Nikolay S Outchkourov;Jose M Muiño;Kerstin Kaufmann;Wilfred F J van Ijcken

  • Mouse hepatitis coronavirus replication induces host translational shutoff and mRNA decay, with concomitant formation of stress granules and processing bodies

    Matthijs Raaben;Marian J. A. Groot Koerkamp;Peter J. M. Rottier;Cornelis A. M. De Haan

  • Functional Overlap and Regulatory Links Shape Genetic Interactions between Signaling Pathways

    Sake van Wageningen;Patrick Kemmeren;Philip Lijnzaad;Philip Lijnzaad;Thanasis Margaritis

  • Specificity factor of yeast mitochondrial RNA polymerase: purification and interaction with core RNA polymerase

    A H Schinkel;M J Koerkamp;E P Touw;H F Tabak

  • Dissection of Transient Oxidative Stress Response in Saccharomyces cerevisiae by Using DNA Microarrays

    Marian Groot Koerkamp;Martijn Rep;Harmen J. Bussemaker;Guy P.M.A. Hardy

  • Possible role of the innate immunity in temporal lobe epilepsy.

    Koen L I van Gassen;Marina de Wit;Marian J A Groot Koerkamp;Marije G A Rensen

  • Cell cycle population effects in perturbation studies

    Eoghan O'Duibhir;Philip Lijnzaad;Joris J. Benschop;Tineke L. Lenstra

  • E2F7 represses a network of oscillating cell cycle genes to control S-phase progression

    Bart Westendorp;Michal Mokry;Marian J.A. Groot Koerkamp;Frank C.P. Holstege

  • The Cytosolic DnaJ-like Protein Djp1p Is Involved Specifically in Peroxisomal Protein Import

    E H Hettema;C C Ruigrok;M G Koerkamp;M van den Berg

  • Specification of dopaminergic subsets involves interplay of En1 and Pitx3

    Jesse V. Veenvliet;Maria T. M. Alves dos Santos;Willemieke M. Kouwenhoven;Lars von Oerthel

Frequent Co-Authors

Frank C. P. Holstege
Frank C. P. Holstege Utrecht University
Marten P. Smidt
Marten P. Smidt University of Amsterdam
Boudewijn M. T. Burgering
Boudewijn M. T. Burgering Utrecht University
Nick S. Macklon
Nick S. Macklon University of Copenhagen
Henk F. Tabak
Henk F. Tabak University of Amsterdam
Martien J H Kas
Martien J H Kas University of Groningen
Cobi Jacoba Johanna Heijnen
Cobi Jacoba Johanna Heijnen The University of Texas MD Anderson Cancer Center
Paul J. Coffer
Paul J. Coffer Utrecht University
Berend Snel
Berend Snel Utrecht University
Edwin Cuppen
Edwin Cuppen Utrecht University

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