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Molecular Biology

D-Index
80
Citations
26936
World Ranking
991
National Ranking
80

Overview

Karsten Rippe is affiliated with the German Cancer Research Center in Germany. Their research spans multiple fields of study, primarily within Biochemistry, Genetics and Molecular Biology, and Medicine. The subfields they focus on include Molecular Biology, Immunology, Hematology, Cancer Research, and Genetics.

The main topics of Karsten Rippe's work cover Multiple Myeloma Research and Treatments, Cancer Genomics and Diagnostics, RNA Research and Splicing, Genomics and Chromatin Dynamics, Single-cell and Spatial Transcriptomics, CAR-T Cell Therapy Research, and RNA and Protein Synthesis Mechanisms.

Karsten Rippe has contributed to several recent papers, including:

  • Patterns of somatic structural variation in human cancer genomes, 2020, Nature
  • Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing, 2020, Nature Genetics
  • Single-cell transcriptomes of the human skin reveal age-related loss of fibroblast priming, 2020, Communications Biology
  • Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition, 2020, Nature Genetics
  • Mouse Heterochromatin Adopts Digital Compaction States without Showing Hallmarks of HP1-Driven Liquid-Liquid Phase Separation, 2020, Molecular Cell

Their frequent co-authors include Jan-Philipp Mallm, Simon Steiger, Hartmut Goldschmidt, Niels Weinhold, and Kadir C. Akdemir.

Karsten Rippe's publications are often found in venues such as bioRxiv (Cold Spring Harbor Laboratory), Blood, Nature Communications, Clinical Lymphoma Myeloma & Leukemia, and Nature Genetics.

Best Publications

  • Capturing Chromosome Conformation

    Job Dekker;Karsten Rippe;Martijn Dekker;Nancy Kleckner

  • Pan-cancer analysis of whole genomes

    Peter J. Campbell;Gad Getz;Jan O. Korbel;Joshua M. Stuart

  • Patterns of somatic structural variation in human cancer genomes

    Yilong Li;Nicola D Roberts;Jeremiah A Wala;Jeremiah A Wala;Ofer Shapira;Ofer Shapira

  • Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing

    Isidro Cortés-Ciriano;Jake June-Koo Lee;Ruibin Xi;Dhawal Jain

  • Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition.

    Bernardo Rodriguez-Martin;Bernardo Rodriguez-Martin;Eva G. Alvarez;Eva G. Alvarez;Adrian Baez-Ortega;Jorge Zamora

  • Loss of the abundant nuclear non-coding RNA MALAT1 is compatible with life and development.

    Moritz Eißmann;Tony Gutschner;Monika Hämmerle;Stefan Günther

  • SIRT6 Recruits SNF2H to DNA Break Sites, Preventing Genomic Instability through Chromatin Remodeling

    Debra Toiber;Fabian Erdel;Karim Bouazoune;Dafne M. Silberman;Dafne M. Silberman

  • Action at a distance: DNA-looping and initiation of transcription

    Karsten Rippe;Peter H. von Hippel;Jörg Langowski

  • Single-cell transcriptomes of the human skin reveal age-related loss of fibroblast priming

    Llorenç Solé-Boldo;Günter Raddatz;Sabrina Schütz;Jan-Philipp Mallm

  • Histone acetylation increases chromatin accessibility.

    Sabine M. Görisch;Malte Wachsmuth;Katalin Fejes Tóth;Peter Lichter

  • Formation of Chromatin Subcompartments by Phase Separation

    Fabian Erdel;Karsten Rippe

  • Trichostatin A-induced histone acetylation causes decondensation of interphase chromatin

    Katalin Fejes Tóth;Tobias A. Knoch;Malte Wachsmuth;Monika Frank-Stöhr

  • DNMT and HDAC inhibitors induce cryptic transcription start sites encoded in long terminal repeats.

    David Brocks;Christopher R. Schmidt;Michael Daskalakis;Hyo Sik Jang

  • Genome-wide nucleosome positioning during embryonic stem cell development

    Vladimir B Teif;Yevhen Vainshtein;Maïwen Caudron-Herger;Jan-Philipp Mallm

  • Integrative genomic and transcriptomic analysis of leiomyosarcoma

    Priya Chudasama;Sadaf S. Mughal;Mathijs A. Sanders;Mathijs A. Sanders;Daniel Hübschmann;Daniel Hübschmann

  • Mouse Heterochromatin Adopts Digital Compaction States without Showing Hallmarks of HP1-Driven Liquid-Liquid Phase Separation

    Fabian Erdel;Fabian Erdel;Anne Rademacher;Rifka Vlijm;Jana Tünnermann

  • The 4D nucleome: Evidence for a dynamic nuclear landscape based on co-aligned active and inactive nuclear compartments.

    Thomas Cremer;Marion Cremer;Barbara Hübner;Hilmar Strickfaden

  • Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer

    Kadir C Akdemir;Victoria T Le;Sahaana Chandran;Yilong Li

  • HP1 Is Involved in Regulating the Global Impact of DNA Methylation on Alternative Splicing

    Ahuvi Yearim;Sahar Gelfman;Sahar Gelfman;Ronna Shayevitch;Shai Melcer

  • Making contacts on a nucleic acid polymer.

    Karsten Rippe

Frequent Co-Authors

Benedikt Brors
Benedikt Brors German Cancer Research Center
Karl Rohr
Karl Rohr Heidelberg University
Matthias Schlesner
Matthias Schlesner University of Augsburg
Thomas M. Jovin
Thomas M. Jovin Max Planck Society
Roland Eils
Roland Eils Charité - University Medicine Berlin
Peter Lichter
Peter Lichter German Cancer Research Center
Jörg Langowski
Jörg Langowski German Cancer Research Center
David T. W. Jones
David T. W. Jones German Cancer Research Center
Stephan Stilgenbauer
Stephan Stilgenbauer University of Ulm
Christoph Plass
Christoph Plass German Cancer Research Center

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