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Biology and Biochemistry

D-Index
77
Citations
20077
World Ranking
4811
National Ranking
2321

Research.com Recognitions

  • 2012 - SIAM Fellow For contributions to integration, optimization, and modeling techniques for the study of biomolecular structure and function.
  • 2005 - Fellow of American Physical Society (APS) Citation Dr Tamar Schlick has developed methods for molecular dynamics computations of biological molecules that have elucidated the structure and function of supercoiled DNA and chromatin, and led to new insights into DNA polymerase mechanisms and RNA structure
  • 2003 - Fellow of the American Association for the Advancement of Science (AAAS)
  • 2000 - Fellow of John Simon Guggenheim Memorial Foundation
  • 1993 - Fellow of Alfred P. Sloan Foundation

Overview

Tamar Schlick is affiliated with New York University in the United States. Their research predominantly lies within the field of Biochemistry, Genetics, and Molecular Biology, with specific focus on Molecular Biology, Plant Science, Ecology, Infectious Diseases, and Genetics as subfields.

The scientist's main research topics include:

  • Genomics and Chromatin Dynamics
  • RNA and protein synthesis mechanisms
  • RNA Research and Splicing
  • RNA modifications and cancer
  • Chromosomal and Genetic Variations
  • Bacteriophages and microbial interactions
  • CRISPR and Genetic Engineering

Schlick has contributed to publications in several venues, with frequent appearances in:

  • Biophysical Journal
  • Zenodo (CERN European Organization for Nuclear Research)
  • bioRxiv (Cold Spring Harbor Laboratory)
  • UNC Libraries
  • Proceedings of the National Academy of Sciences

Recent notable papers include:

  • "Histone H1 loss drives lymphoma by disrupting 3D chromatin architecture," 2020, Nature
  • "Biomolecular modeling thrives in the age of technology," 2021, Nature Computational Science
  • "Mesoscale Modeling and Single-Nucleosome Tracking Reveal Remodeling of Clutch Folding and Dynamics in Stem Cell Differentiation," 2021, Cell Reports
  • "To Knot or Not to Knot: Multiple Conformations of the SARS-CoV-2 Frameshifting RNA Element," 2021, Journal of the American Chemical Society
  • "Biomolecular Modeling and Simulation: A Prospering Multidisciplinary Field," 2021, Annual Review of Biophysics

Frequent co-authors collaborating with Schlick include:

  • Stephanie Portillo-Ledesma
  • Shuting Yan
  • Zilong Li
  • Qiyao Zhu
  • Alain Laederach

The scientist has received several fellowships and honors, including:

  • SIAM Fellow (2012) for contributions to integration, optimization, and modeling techniques for the study of biomolecular structure and function
  • Fellow of the American Physical Society (APS) (2005) with recognition for work on molecular dynamics computations of biological molecules, elucidating DNA and RNA mechanisms
  • Fellow of the American Association for the Advancement of Science (AAAS) (2003)
  • Fellow of John Simon Guggenheim Memorial Foundation (2000)
  • Fellow of Alfred P. Sloan Foundation (1993)

Best Publications

  • Molecular Modeling and Simulation: An Interdisciplinary Guide

    Tamar Schlick

  • Cohesin Loss Eliminates All Loop Domains

    Suhas S.P. Rao;Suhas S.P. Rao;Su Chen Huang;Brian Glenn St Hilaire;Brian Glenn St Hilaire;Jesse M. Engreitz

  • Lecture Notes in Computational Science and Engineering

    M. Griebel;D. Roose;T. Schlick;A. Tveito

  • Computational Partial Differential Equations: Numerical Methods and Diffpack Programming

    Hans Petter Langtangen;D. Keyes;R. Nieminen;M. Griebel

  • Evidence for heteromorphic chromatin fibers from analysis of nucleosome interactions

    Sergei A. Grigoryev;Gaurav Arya;Sarah Correll;Christopher L. Woodcock

  • Algorithmic Challenges in Computational Molecular Biophysics

    Tamar Schlick;Robert D Skeel;Axel T Brunger;Laxmikant V Kalé

  • Optimized particle-mesh Ewald/multiple-time step integration for molecular dynamics simulations

    Paul F. Batcho;David A. Case;Tamar Schlick

  • Exploring the repertoire of RNA secondary motifs using graph theory; implications for RNA design

    Hin Hark Gan;Samuela Pasquali;Tamar Schlick

  • Modeling superhelical DNA: recent analytical and dynamic approaches

    Tamar Schlick

  • Role of histone tails in chromatin folding revealed by a mesoscopic oligonucleosome model.

    Gaurav Arya;Tamar Schlick

  • A Family of Symplectic Integrators: Stability, Accuracy, and Molecular Dynamics Applications

    Robert D. Skeel;Guihua Zhang;Tamar Schlick

  • A Tale of Tails: How Histone Tails Mediate Chromatin Compaction in Different Salt and Linker Histone Environments†

    Gaurav Arya;Tamar Schlick

  • Histone H1 loss drives lymphoma by disrupting 3D chromatin architecture

    Nevin Yusufova;Andreas Kloetgen;Matt Teater;Adewola Osunsade

  • Numerical Experience with Limited-Memory Quasi-Newton and Truncated Newton Methods

    X. Zou;I. M. Navon;M. Berger;K. H. Phua

  • Critical role of magnesium ions in DNA polymerase beta's closing and active site assembly.

    Linjing Yang;Karunesh Arora;William A. Beard;Samuel H. Wilson

  • A-Tract bending: insights into experimental structures by computational models.

    Daniel Strahs;Tamar Schlick

  • Biomolecular dynamics at long timesteps: bridging the timescale gap between simulation and experimentation.

    Tamar Schlick;Eric Barth;Margaret Mandziuk

  • Biomolecular modeling and simulation: a field coming of age

    Tamar Schlick;Rosana Collepardo-Guevara;Leif Arthur Halvorsen;Segun Jung

  • A Combined Wormlike-Chain and Bead Model for Dynamic Simulations of Long Linear DNA

    Hongmei Jian;Alexander V. Vologodskii;Tamar Schlick

  • Computational approaches to RNA structure prediction, analysis, and design.

    Christian Laing;Tamar Schlick

Frequent Co-Authors

Michael Griebel
Michael Griebel University of Bonn
Dirk Roose
Dirk Roose KU Leuven
William A. Beard
William A. Beard National Institutes of Health
Samuel H. Wilson
Samuel H. Wilson National Institutes of Health
Charles S. Peskin
Charles S. Peskin Courant Institute of Mathematical Sciences
Wilma K. Olson
Wilma K. Olson Rutgers, The State University of New Jersey
Suse Broyde
Suse Broyde New York University
Robert D. Skeel
Robert D. Skeel Purdue University West Lafayette
Michael L. Overton
Michael L. Overton Courant Institute of Mathematical Sciences
Eric S. Lander
Eric S. Lander Broad Institute

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