Proteomics, Computational biology, Bioinformatics, Tandem mass spectrometry and Mass spectrometry are his primary areas of study. In his research on the topic of Proteomics, Posterior probability and Statistical model is strongly related with Data mining. His Computational biology study combines topics in areas such as Genetics, Regulation of gene expression, Proteome, Gene and Peptide spectral library.
The various areas that Alexey I. Nesvizhskii examines in his Peptide spectral library study include Mass spectrometry data format and ProteinProphet. The study incorporates disciplines such as Identification, Quantitative proteomics, Peptide sequence, Artificial intelligence and Pattern recognition in addition to Bioinformatics. His research investigates the connection with Tandem mass spectrometry and areas like Shotgun proteomics which intersect with concerns in Bayes' theorem, Linear model and Experimental data.
His primary areas of study are Proteomics, Computational biology, Cell biology, Proteome and Data mining. His Proteomics research integrates issues from Identification, Tandem mass spectrometry, Mass spectrometry and Bioinformatics. His Mass spectrometry research includes elements of Artificial intelligence and Pattern recognition.
Alexey I. Nesvizhskii combines subjects such as Proteogenomics, Gene, Protein–protein interaction and Shotgun proteomics with his study of Computational biology. His studies in Proteome integrate themes in fields like PeptideAtlas and Cancer research. The Data mining study combines topics in areas such as Database search engine, PeptideProphet, False discovery rate, Interactome and Workflow.
Alexey I. Nesvizhskii mainly focuses on Computational biology, Proteomics, Cell biology, Cancer research and Mass spectrometry. His Computational biology study incorporates themes from Gene, Peptide and Protein–protein interaction. Many of his research projects under Proteomics are closely connected to Sensitivity with Sensitivity, tying the diverse disciplines of science together.
His Cell biology research incorporates themes from Parthenolide and Carboxypeptidase. His research in Cancer research intersects with topics in Immune checkpoint, Wnt signaling pathway, Tumor microenvironment, Familial partial lipodystrophy and Sarcoma. His Mass spectrometry research is multidisciplinary, incorporating perspectives in Label-free quantification, Algorithm, Data mining and Missing data.
Alexey I. Nesvizhskii focuses on Proteomics, Computational biology, Cell biology, Cancer research and Proteogenomics. Alexey I. Nesvizhskii usually deals with Proteomics and limits it to topics linked to Identification and Data visualization, Artificial intelligence and Visualization. In his articles, Alexey I. Nesvizhskii combines various disciplines, including Computational biology and Extramural.
His Cell biology research incorporates elements of Cytotoxic T cell, Programmed cell death, Ubiquitin ligase and Ripoptosome assembly. His Cancer research research also works with subjects such as
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Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search.
Andrew Keller;Alexey I. Nesvizhskii;Eugene Kolker;Ruedi Aebersold.
Analytical Chemistry (2002)
A statistical model for identifying proteins by tandem mass spectrometry.
Alexey I. Nesvizhskii;Andrew Keller;Eugene Kolker;Ruedi Aebersold.
Analytical Chemistry (2003)
Interpretation of Shotgun Proteomic Data The Protein Inference Problem
Alexey I. Nesvizhskii;Ruedi Aebersold;Ruedi Aebersold.
Molecular & Cellular Proteomics (2005)
The CRAPome: a contaminant repository for affinity purification–mass spectrometry data
Dattatreya Mellacheruvu;Zachary Wright;Amber L. Couzens;Jean Philippe Lambert.
Nature Methods (2013)
Analysis and validation of proteomic data generated by tandem mass spectrometry.
Alexey I Nesvizhskii;Olga Vitek;Ruedi Aebersold;Ruedi Aebersold.
Nature Methods (2007)
The PeptideAtlas project
Frank Desiere;Eric W. Deutsch;Nichole L. King;Alexey I. Nesvizhskii.
Nucleic Acids Research (2006)
A guided tour of the Trans‐Proteomic Pipeline
Eric W. Deutsch;Luis Mendoza;David Shteynberg;Terry Farrah.
Proteomics (2010)
A global protein kinase and phosphatase interaction network in yeast.
Ashton Breitkreutz;Hyungwon Choi;Jeffrey R. Sharom;Lorrie Boucher.
Science (2010)
SAINT: probabilistic scoring of affinity purification-mass spectrometry data
Hyungwon Choi;Brett Larsen;Zhen Yuan Lin;Ashton Breitkreutz.
Nature Methods (2011)
The Need for Guidelines in Publication of Peptide and Protein Identification Data Working Group On Publication Guidelines For Peptide And Protein Identification Data
Steven Carr;Ruedi Aebersold;Michael Baldwin;Al Burlingame.
Molecular & Cellular Proteomics (2004)
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