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215
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Biology and Biochemistry

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220
Citations
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John R. Yates publication distribution in Biology and Biochemistry in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Biology and Biochemistry in 2026. The highlighted bar marks where John R. Yates sits on this spectrum.

47–56 publications: 8 scientists 57–66 publications: 35 scientists 67–76 publications: 106 scientists 77–86 publications: 231 scientists 87–96 publications: 414 scientists 97–106 publications: 546 scientists 107–116 publications: 704 scientists 117–126 publications: 849 scientists 127–136 publications: 980 scientists 137–146 publications: 942 scientists 147–156 publications: 969 scientists 157–166 publications: 950 scientists 167–176 publications: 951 scientists 177–186 publications: 915 scientists 187–196 publications: 787 scientists 197–206 publications: 841 scientists 207–216 publications: 735 scientists 217–226 publications: 709 scientists 227–236 publications: 651 scientists 237–246 publications: 605 scientists 247–256 publications: 510 scientists 257–266 publications: 524 scientists 267–276 publications: 434 scientists 277–286 publications: 418 scientists 287–296 publications: 350 scientists 297–306 publications: 363 scientists 307–316 publications: 315 scientists 317–326 publications: 296 scientists 327–336 publications: 261 scientists 337–346 publications: 240 scientists 347–356 publications: 219 scientists 357–366 publications: 197 scientists 367–376 publications: 154 scientists 377–386 publications: 161 scientists 387–396 publications: 155 scientists 397–406 publications: 145 scientists 407–416 publications: 124 scientists 417–426 publications: 112 scientists 427–436 publications: 132 scientists 437–446 publications: 116 scientists 447–456 publications: 99 scientists 457–466 publications: 81 scientists 467–476 publications: 91 scientists 477–486 publications: 80 scientists 487–496 publications: 80 scientists 497–506 publications: 60 scientists 507–516 publications: 36 scientists 517–526 publications: 46 scientists 527–536 publications: 54 scientists 537–546 publications: 44 scientists 547–556 publications: 43 scientists 557–566 publications: 43 scientists 567–576 publications: 42 scientists 577–586 publications: 25 scientists 587–596 publications: 34 scientists 597–606 publications: 23 scientists 607–616 publications: 33 scientists 617–626 publications: 31 scientists 627–636 publications: 27 scientists 637–646 publications: 25 scientists 647–656 publications: 28 scientists 657–666 publications: 34 scientists 667–676 publications: 18 scientists 677–686 publications: 16 scientists 687–696 publications: 10 scientists 697–706 publications: 12 scientists 707–716 publications: 21 scientists 717–726 publications: 12 scientists 727–736 publications: 12 scientists 737–746 publications: 10 scientists 747–756 publications: 7 scientists 757–766 publications: 13 scientists 767–776 publications: 15 scientists 777–786 publications: 13 scientists 787–796 publications: 9 scientists 797–806 publications: 9 scientists 807–816 publications: 7 scientists 817–826 publications: 4 scientists 827–836 publications: 9 scientists 837–846 publications: 7 scientists 847–856 publications: 3 scientists 857–866 publications: 5 scientists 867–876 publications: 5 scientists 877–886 publications: 11 scientists 887–896 publications: 3 scientists 897–906 publications: 4 scientists 907–916 publications: 7 scientists 917–926 publications: 5 scientists 927–936 publications: 6 scientists 937–946 publications: 6 scientists 947–956 publications: 3 scientists 957–966 publications: 7 scientists 967–976 publications: 2 scientists 977–986 publications: 2 scientists 987–996 publications: 1 scientists 997–1,006 publications: 5 scientists 1,007–1,016 publications: 2 scientists 1,017–1,026 publications: 2 scientists 1,027 publications: 1 scientists 1,028+ publications: 100 scientists
47 publications 1,028+

This scientist: 1,209 publications — 100th percentile

100% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 1,028 publications or more.

John R. Yates D-index placement in Biology and Biochemistry in 2026

The chart shows the D-index (discipline H-index) distribution of Biology and Biochemistry scientists ranked by Research.com in 2026. The highlighted bar marks where John R. Yates sits on this spectrum.

40–41 D-Index: 80 scientists 42–43 D-Index: 183 scientists 44–45 D-Index: 317 scientists 46–47 D-Index: 504 scientists 48–49 D-Index: 718 scientists 50–51 D-Index: 900 scientists 52–53 D-Index: 1,026 scientists 54–55 D-Index: 1,150 scientists 56–57 D-Index: 1,236 scientists 58–59 D-Index: 1,253 scientists 60–61 D-Index: 1,163 scientists 62–63 D-Index: 1,131 scientists 64–65 D-Index: 1,032 scientists 66–67 D-Index: 897 scientists 68–69 D-Index: 814 scientists 70–71 D-Index: 715 scientists 72–73 D-Index: 709 scientists 74–75 D-Index: 596 scientists 76–77 D-Index: 512 scientists 78–79 D-Index: 473 scientists 80–81 D-Index: 412 scientists 82–83 D-Index: 373 scientists 84–85 D-Index: 358 scientists 86–87 D-Index: 285 scientists 88–89 D-Index: 273 scientists 90–91 D-Index: 227 scientists 92–93 D-Index: 208 scientists 94–95 D-Index: 193 scientists 96–97 D-Index: 153 scientists 98–99 D-Index: 157 scientists 100–101 D-Index: 148 scientists 102–103 D-Index: 120 scientists 104–105 D-Index: 113 scientists 106–107 D-Index: 100 scientists 108–109 D-Index: 86 scientists 110–111 D-Index: 67 scientists 112–113 D-Index: 72 scientists 114–115 D-Index: 73 scientists 116–117 D-Index: 64 scientists 118–119 D-Index: 53 scientists 120–121 D-Index: 60 scientists 122–123 D-Index: 54 scientists 124–125 D-Index: 43 scientists 126–127 D-Index: 38 scientists 128–129 D-Index: 49 scientists 130–131 D-Index: 26 scientists 132–133 D-Index: 18 scientists 134–135 D-Index: 23 scientists 136–137 D-Index: 32 scientists 138–139 D-Index: 32 scientists 140–141 D-Index: 27 scientists 142–143 D-Index: 19 scientists 144–145 D-Index: 22 scientists 146–147 D-Index: 12 scientists 148–149 D-Index: 16 scientists 150–151 D-Index: 14 scientists 152–153 D-Index: 10 scientists 154–155 D-Index: 13 scientists 156–157 D-Index: 10 scientists 158–159 D-Index: 7 scientists 160–161 D-Index: 9 scientists 162–163 D-Index: 13 scientists 164–165 D-Index: 4 scientists 166 D-Index: 4 scientists 167+ D-Index: 98 scientists
40 D-Index 167+

This scientist: 220 D-Index — 100th percentile

100% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 167 D-Index or more.

Research.com Recognitions

  • 2026 - Research.com Biology and Biochemistry in United States Leader Award
  • 2025 - Research.com Best Scientists Award
  • 2025 - Research.com Biology and Biochemistry in United States Leader Award
  • 2023 - Research.com Biology and Biochemistry in United States Leader Award

Overview

John R. Yates is affiliated with the Scripps Research Institute in the United States. Their work spans primarily the fields of Biochemistry, Genetics, and Molecular Biology, with a focus on molecular biology as well as related subfields such as the history and philosophy of science, spectroscopy, genetics, and cell biology.

The topics covered in their research include academic writing and publishing, advanced proteomics techniques and applications, RNA research and splicing, RNA modifications and cancer, HIV research and treatment, RNA and protein synthesis mechanisms, and mass spectrometry techniques and applications.

Yates has contributed to several prominent scientific journals and venues. Frequent publication outlets include:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Journal of Proteome Research
  • Journal of the American Society for Mass Spectrometry
  • Cell Reports
  • Science

Their recent papers cover a range of topics and appear in high-impact journals:

  • "The SARS-CoV-2 nucleocapsid phosphoprotein forms mutually exclusive condensates with RNA and the membrane-associated M protein," 2021, Nature Communications
  • "Structural analysis of full-length SARS-CoV-2 spike protein from an advanced vaccine candidate," 2020, Science
  • "HSP70 chaperones RNA-free TDP-43 into anisotropic intranuclear liquid spherical shells," 2021, Science
  • "Initial recommendations for performing, benchmarking and reporting single-cell proteomics experiments," 2023, Nature Methods
  • "Evolutionary Persistence of DNA Methylation for Millions of Years after Ancient Loss of a De Novo Methyltransferase," 2020, Cell

Yates collaborates frequently with a set of coauthors, including Joseph A. Loo, Cynthia J. Burrows, Shu Wang, Hyun Jae Kim, and Gerald J. Meyer. These partnerships have been prolific over many publications.

Best Publications

  • An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database.

    Jimmy K. Eng;Ashley L. McCormack;John R. Yates

  • Large-scale analysis of the yeast proteome by multidimensional protein identification technology.

    Michael P. Washburn;Dirk Wolters;John R. Yates;John R. Yates

  • Direct analysis of protein complexes using mass spectrometry

    Andrew J. Link;Jimmy Eng;David M. Schieltz;Edwin Carmack

  • A Model for Random Sampling and Estimation of Relative Protein Abundance in Shotgun Proteomics

    Hongbin Liu;Hongbin Liu;Rovshan G. Sadygov;John R. Yates;John R. Yates

  • Wnt proteins are lipid-modified and can act as stem cell growth factors

    Karl Willert;Jeffrey D. Brown;Esther Danenberg;Andrew W. Duncan

  • Microglia Promote Learning-Dependent Synapse Formation through Brain-Derived Neurotrophic Factor

    Christopher N. Parkhurst;Guang Yang;Ipe Ninan;Jeffrey N. Savas

  • An Automated Multidimensional Protein Identification Technology for Shotgun Proteomics

    Dirk A. Wolters;Michael P. Washburn;John R. Yates

  • Identification of the tuberous sclerosis gene TSC1 on chromosome 9q34

    Marjon van Slegtenhorst;Ronald de Hoogt;Caroline Hermans;Mark Nellist

  • A proteomic view of the Plasmodium falciparum life cycle

    Laurence Florens;Michael P. Washburn;J. Dale Raine;Robert M. Anthony

  • Method to Correlate Tandem Mass Spectra of Modified Peptides to Amino Acid Sequences in the Protein Database

    John R. Yates;Jimmy K. Eng;Ashley L. McCormack;David. Schieltz

  • Protein Analysis by Shotgun/Bottom-up Proteomics

    Yaoyang Zhang;Bryan R. Fonslow;Bing Shan;Moon-Chang Baek;Moon-Chang Baek

  • Protein sequencing by tandem mass spectrometry

    Donald F. Hunt;John R. Yates;Jeffrey Shabanowitz;Scott Winston

  • Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription.

    Michael J. Carrozza;Bing Li;Laurence Florens;Tamaki Suganuma

  • The hMre11/hRad50 protein complex and Nijmegen breakage syndrome: linkage of double-strand break repair to the cellular DNA damage response.

    James P Carney;James P Carney;Richard S Maser;Heidi Olivares;Elizabeth M Davis

  • Proteomics by Mass Spectrometry: Approaches, Advances, and Applications

    John R. Yates;Cristian I. Ruse;Aleksey Nakorchevsky

  • Assembly and aggregation properties of synthetic Alzheimer's A4/beta amyloid peptide analogs.

    Debra Burdick;Brian Soreghan;Michael Kwon;Joseph Kosmoski

  • Role of Rpn11 Metalloprotease in Deubiquitination and Degradation by the 26S Proteasome

    Rati Verma;L. Aravind;Robert Oania;W. Hayes McDonald

  • Current Protocols in Bioinformatics

    Alex Bateman;William R. Pearson;Lincoln D. Stein;Gary D. Stormo

  • Mass spectrometry and the age of the proteome.

    John R. Yates

  • Clinical Features and Natural History of von Hippel-Lindau Disease

    E R Maher;J R Yates;R Harries;Caroline Benjamin

Frequent Co-Authors

Joseph A. Loo
Joseph A. Loo University of California, Los Angeles
Jonathan V. Sweedler
Jonathan V. Sweedler University of Illinois at Urbana-Champaign
Shu Wang
Shu Wang Chinese Academy of Sciences
Gilbert C. Walker
Gilbert C. Walker University of Toronto
Stuart J. Rowan
Stuart J. Rowan University of Chicago
Prashant V. Kamat
Prashant V. Kamat University of Notre Dame
Marc A. Hillmyer
Marc A. Hillmyer University of Minnesota
Vincent M. Rotello
Vincent M. Rotello University of Massachusetts Amherst
Gregory D. Scholes
Gregory D. Scholes Princeton University

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