World's Best Scientists 2026 revealed!

D-Index & Metrics

Biology and Biochemistry

D-Index
94
Citations
36732
World Ranking
1985
National Ranking
1082

Overview

Joshua J. Coon is affiliated with the University of Wisconsin-Madison in the United States. Their research primarily spans the fields of Biochemistry, Genetics and Molecular Biology, with a substantial body of work also contributing to Medicine.

The subfields where Joshua J. Coon has focused include Molecular Biology, Spectroscopy, Physiology, Cell Biology, and Biomedical Engineering.

Their main research topics cover Advanced Proteomics Techniques and Applications, Mass Spectrometry Techniques and Applications, Metabolomics and Mass Spectrometry Studies, Mitochondrial Function and Pathology, Adipose Tissue and Metabolism, Biofuel Production and Bioconversion, as well as Microbial Metabolic Engineering and Bioproduction.

Joshua J. Coon has published extensively across multiple scientific venues. Frequent publication venues include bioRxiv (Cold Spring Harbor Laboratory), Analytical Chemistry, Nature Communications, Journal of Proteome Research, and Journal of Biological Chemistry.

Some of the recent papers authored include:

  • Large-Scale Multi-omic Analysis of COVID-19 Severity (2020), Cell Systems
  • Global detection of human variants and isoforms by deep proteome sequencing (2023), Nature Biotechnology
  • Mapping Physiological ADP-Ribosylation Using Activated Ion Electron Transfer Dissociation (2020), Cell Reports
  • Defining mitochondrial protein functions through deep multiomic profiling (2022), Nature
  • High-fat diet disrupts REG3γ and gut microbial rhythms promoting metabolic dysfunction (2022), Cell Host & Microbe

Frequent co-authors in their work include Katherine A. Overmyer, Evgenia Shishkova, Michael S. Westphall, Annie Jen, and David J. Pagliarini.

Best Publications

  • Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry

    John E. P. Syka;Joshua J. Coon;Melanie J. Schroeder;Jeffrey Shabanowitz

  • Formic-acid-induced depolymerization of oxidized lignin to aromatics

    Alireza Rahimi;Arne Ulbrich;Joshua J. Coon;Shannon S. Stahl

  • Parallel Reaction Monitoring for High Resolution and High Mass Accuracy Quantitative, Targeted Proteomics

    Amelia C. Peterson;Jason D. Russell;Derek J. Bailey;Michael S. Westphall

  • Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry

    An Chi;Curtis Huttenhower;Lewis Y. Geer;Joshua J. Coon;Joshua J. Coon

  • The utility of ETD mass spectrometry in proteomic analysis.

    Leann M Mikesh;Beatrix Ueberheide;An Chi;Joshua J Coon

  • Calorie Restriction and SIRT3 Trigger Global Reprogramming of the Mitochondrial Protein Acetylome

    Alexander S. Hebert;Kristin E. Dittenhafer-Reed;Wei Yu;Derek J. Bailey

  • The One Hour Yeast Proteome

    Alexander S. Hebert;Alicia L. Richards;Derek J. Bailey;Arne Ulbrich

  • Naturally Occurring Human Urinary Peptides for Use in Diagnosis of Chronic Kidney Disease

    David M. Good;Petra Zürbig;Àngel Argilés;Hartwig W. Bauer

  • Protein identification using sequential ion/ion reactions and tandem mass spectrometry

    Joshua J. Coon;Beatrix Ueberheide;John E. P. Syka;Deanna D. Dryhurst

  • Large-Scale Multi-omic Analysis of COVID-19 Severity.

    Katherine A. Overmyer;Evgenia Shishkova;Ian J. Miller;Joseph Balnis

  • Value of Using Multiple Proteases for Large-Scale Mass Spectrometry-Based Proteomics

    Danielle L. Swaney;Craig D. Wenger;Joshua J. Coon

  • A neutral loss activation method for improved phosphopeptide sequence analysis by quadrupole ion trap mass spectrometry.

    Melanie J. Schroeder;Jeffrey Shabanowitz;Jae C. Schwartz;Donald F. Hunt

  • Performance characteristics of electron transfer dissociation mass spectrometry

    David M. Good;Matthew Wirtala;Graeme C. McAlister;Joshua J. Coon

  • Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors.

    Danielle L Swaney;Graeme C McAlister;Matthew Wirtala;Jae C Schwartz

  • Probing the dynamics of O -GlcNAc glycosylation in the brain using quantitative proteomics

    Nelly Khidekel;Scott B Ficarro;Peter M Clark;Marian C Bryan

  • Decision tree–driven tandem mass spectrometry for shotgun proteomics

    Danielle L Swaney;Graeme C McAlister;Joshua J Coon

  • Clinical proteomics: A need to define the field and to begin to set adequate standards.

    Harald Mischak;Rolf Apweiler;Rosamonde E. Banks;Mark Conaway

  • Recommendations for Biomarker Identification and Qualification in Clinical Proteomics

    Harald Mischak;Guenter Allmaier;Rolf Apweiler;Teresa Attwood

  • Urinary Proteomics in Diabetes and CKD

    Kasper Rossing;Harald Mischak;Mohammed Dakna;Petra Zürbig

  • A dynamic model of proteome changes reveals new roles for transcript alteration in yeast

    M Violet Lee;Scott E Topper;Shane L Hubler;James Hose

Frequent Co-Authors

Robert Landick
Robert Landick University of Wisconsin–Madison
Audrey P. Gasch
Audrey P. Gasch University of Wisconsin–Madison
Donald F. Hunt
Donald F. Hunt University of Virginia
Harald Mischak
Harald Mischak University of Glasgow
James A. Thomson
James A. Thomson University of California, Santa Barbara
Alan D. Attie
Alan D. Attie University of Wisconsin–Madison
John Ralph
John Ralph Great Lakes Bioenergy Research Center
Jean-Michel Ané
Jean-Michel Ané University of Wisconsin–Madison
Deane F. Mosher
Deane F. Mosher University of Wisconsin–Madison
Jan Novak
Jan Novak University of Alabama at Birmingham

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