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Genetics

D-Index
48
Citations
16221
World Ranking
4023
National Ranking
1736

Overview

Audrey P. Gasch is affiliated with the University of Wisconsin-Madison in the United States. Their research primarily lies within the broad field of Biochemistry, Genetics, and Molecular Biology, with a focus on several subfields including Molecular Biology, Genetics, Plant Science, Cell Biology, and Biomedical Engineering.

The scientific work of Audrey P. Gasch spans multiple topics, highlighting expertise and contributions in areas such as:

  • Fungal and yeast genetics research
  • Chromosomal and genetic variations
  • Microbial metabolic engineering and bioproduction
  • Genomics and phylogenetic studies
  • RNA and protein synthesis mechanisms
  • Biofuel production and bioconversion
  • Genetic mapping and diversity in plants and animals

Gasch has authored numerous papers with notable publications including:

  • The genetic basis of aneuploidy tolerance in wild yeast, 2020, eLife
  • Crabtree/Warburg-like aerobic xylose fermentation by engineered Saccharomyces cerevisiae, 2021, Metabolic Engineering
  • Phosphoproteome Response to Dithiothreitol Reveals Unique Versus Shared Features of Saccharomyces cerevisiae Stress Responses, 2020, Journal of Proteome Research
  • Fast and deep phosphoproteome analysis with the Orbitrap Astral mass spectrometer, 2024, Nature Communications
  • Genetic variation in aneuploidy prevalence and tolerance across Saccharomyces cerevisiae lineages, 2021, Genetics

The frequent coauthors collaborating with Audrey P. Gasch are:

  • James Hose
  • Michael Place
  • H Auguste Dutcher
  • Chris Todd Hittinger
  • Joshua J. Coon

Their work has been published in venues where they have multiple contributions, including:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • eLife
  • Genetics
  • RNA
  • G3 Genes Genomes Genetics

Best Publications

  • Genomic expression programs in the response of yeast cells to environmental changes.

    Audrey P. Gasch;Paul T. Spellman;Camilla M. Kao;Orna Carmel-Harel

  • Genomic expression responses to DNA-damaging agents and the regulatory role of the yeast ATR homolog Mec1p.

    Audrey P. Gasch;Mingxia Huang;Sandra Metzner;David Botstein

  • Exploring the conditional coregulation of yeast gene expression through fuzzy k-means clustering

    Audrey P Gasch;Michael B Eisen;Michael B Eisen

  • The genomics of yeast responses to environmental stress and starvation.

    Audrey P. Gasch;Margaret Werner-Washburne

  • Genome-wide Analysis of Gene Expression Regulated by the Calcineurin/Crz1p Signaling Pathway in Saccharomyces cerevisiae

    Hiroyuki Yoshimoto;Kirstie Saltsman;Audrey P. Gasch;Hong Xia Li

  • Rich probabilistic models for gene expression.

    Eran Segal;Benjamin Taskar;Audrey P. Gasch;Nir Friedman

  • Stress-activated Genomic Expression Changes Serve a Preparative Role for Impending Stress in Yeast

    David B. Berry;Audrey P. Gasch

  • Genome-wide characterization of the Zap1p zinc-responsive regulon in yeast

    Thomas J. Lyons;Audrey P. Gasch;L. Alex Gaither;David Botstein

  • The DIMINUTO gene of Arabidopsis is involved in regulating cell elongation.

    Taku Takahashi;Alexander Gasch;Naoko Nishizawa;Nam Hai Chua

  • A dynamic model of proteome changes reveals new roles for transcript alteration in yeast

    M Violet Lee;Scott E Topper;Shane L Hubler;James Hose

  • SCnorm: robust normalization of single-cell RNA-seq data

    Rhonda Bacher;Li-Fang Chu;Ning Leng;Audrey P Gasch

  • Conservation and evolution of cis-regulatory systems in ascomycete fungi.

    Audrey P Gasch;Alan M Moses;Derek Y Chiang;Hunter B Fraser

  • Comparative genomics of the environmental stress response in ascomycete fungi

    Audrey P. Gasch

  • Comparative genomics of xylose-fermenting fungi for enhanced biofuel production

    Dana J. Wohlbach;Dana J. Wohlbach;Alan Kuo;Trey K. Sato;Katlyn M. Potts

  • Methionine sulfoxide reductase regulation of yeast lifespan reveals reactive oxygen species-dependent and -independent components of aging

    Ahmet Koc;Audrey P. Gasch;Julian C. Rutherford;Hwa-Young Kim

  • Variations in stress sensitivity and genomic expression in diverse S. cerevisiae isolates.

    Daniel J. Kvitek;Jessica L. Will;Audrey P. Gasch

  • The environmental stress response: a common yeast response to diverse environmental stresses

    Audrey P. Gasch

  • Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress.

    Audrey P. Gasch;Audrey P. Gasch;Feiqiao Brian Yu;James Hose;Leah E. Escalante

  • Cellular Memory of Acquired Stress Resistance in Saccharomyces cerevisiae

    Qiaoning Guan;Suraiya Haroon;Diego González Bravo;Jessica L. Will

  • Role of thioredoxin reductase in the Yap1p-dependent response to oxidative stress in Saccharomyces cerevisiae

    Orna Carmel-Harel;Robert Stearman;Audrey P. Gasch;David Botstein

Frequent Co-Authors

Joshua J. Coon
Joshua J. Coon University of Wisconsin–Madison
Robert Landick
Robert Landick University of Wisconsin–Madison
Patrick O. Brown
Patrick O. Brown Stanford University
David Botstein
David Botstein Princeton University
Chris Todd Hittinger
Chris Todd Hittinger University of Wisconsin–Madison
Lloyd M. Smith
Lloyd M. Smith University of Wisconsin–Madison
Mark Craven
Mark Craven University of Wisconsin–Madison
Christina Kendziorski
Christina Kendziorski University of Wisconsin–Madison
Igor V. Grigoriev
Igor V. Grigoriev Lawrence Berkeley National Laboratory
Aseem Z. Ansari
Aseem Z. Ansari University of Wisconsin–Madison

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