Jimmy K. Eng

Overview

Best Publications

• An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database.

  Jimmy K. Eng;Ashley L. McCormack;John R. Yates

  7998
  Citations

• The innate immune response to bacterial flagellin is mediated by Toll-like receptor 5.

  Fumitaka Hayashi;Kelly D. Smith;Adrian Ozinsky;Thomas R. Hawn;Thomas R. Hawn

  4794
  Citations

• Direct analysis of protein complexes using mass spectrometry

  Andrew J. Link;Jimmy Eng;David M. Schieltz;Edwin Carmack

  3091
  Citations

• Integrated genomic and proteomic analyses of a systematically perturbed metabolic network.

  Trey Ideker;Vesteinn Thorsson;Jeffrey A. Ranish;Rowan Christmas

  2660
  Citations

• Method to Correlate Tandem Mass Spectra of Modified Peptides to Amino Acid Sequences in the Protein Database

  John R. Yates;Jimmy K. Eng;Ashley L. McCormack;David. Schieltz

  1653
  Citations

• Comet: An open-source MS/MS sequence database search tool

  Jimmy K. Eng;Tahmina A. Jahan;Michael R. Hoopmann

  1520
  Citations

• Quantitative profiling of differentiation-induced microsomal proteins using isotope-coded affinity tags and mass spectrometry.

  David K. Han;Jimmy Eng;Huilin Zhou;Ruedi Aebersold

  1194
  Citations

• A common open representation of mass spectrometry data and its application to proteomics research

  Patrick G A Pedrioli;Jimmy K Eng;Robert Hubley;Mathijs Vogelzang

  984
  Citations

• Integrated Genomic and Proteomic Analyses of Gene Expression in Mammalian Cells

  Qiang Tian;Serguei B. Stepaniants;Mao Mao;Lee Weng

  961
  Citations

• The PeptideAtlas project

  Frank Desiere;Eric W. Deutsch;Nichole L. King;Alexey I. Nesvizhskii

  908
  Citations

• Complementary Profiling of Gene Expression at the Transcriptome and Proteome Levels in Saccharomyces cerevisiae

  Timothy J. Griffin;Steven P. Gygi;Trey Ideker;Beate Rist

  859
  Citations

• A guided tour of the Trans‐Proteomic Pipeline

  Eric W. Deutsch;Luis Mendoza;David Shteynberg;Terry Farrah

  849
  Citations

• A uniform proteomics MS/MS analysis platform utilizing open XML file formats.

  Andrew Keller;Jimmy K. Eng;Jimmy K. Eng;Ning Zhang;Xiao-Jun Li

  832
  Citations

• Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database.

  Gilbert S. Omenn;David J. States;Marcin Adamski;Thomas W. Blackwell

  830
  Citations

• Development and validation of a spectral library searching method for peptide identification from MS/MS.

  Henry Lam;Eric W. Deutsch;James S. Eddes;Jimmy K. Eng;Jimmy K. Eng

  640
  Citations

• A Multidimensional Chromatography Technology for In-depth Phosphoproteome Analysis

  Claudio P. Albuquerque;Claudio P. Albuquerque;Marcus B. Smolka;Samuel H. Payne;Vineet Bafna

  630
  Citations

• iProphet: Multi-level Integrative Analysis of Shotgun Proteomic Data Improves Peptide and Protein Identification Rates and Error Estimates

  David Shteynberg;Eric W. Deutsch;Henry H N Lam;Jimmy K. Eng

  611
  Citations

• Mining genomes: correlating tandem mass spectra of modified and unmodified peptides to sequences in nucleotide databases.

  John R. Yates;Jimmy K. Eng;Ashley L. McCormack

  544
  Citations

• Identifikation af aminosyrer ved massespektrometri

  Yates John R;Eng James K;Link Andrew J

  477
  Citations

• Proteome analysis of low-abundance proteins using multidimensional chromatography and isotope-coded affinity tags.

  Steven P. Gygi;Beate Rist;Timothy J. Griffin;Jimmy Eng

  462
  Citations