D-Index & Metrics Best Publications
Immunology
Denmark
2023

D-Index & Metrics D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines.

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Immunology D-index 88 Citations 32,932 368 World Ranking 712 National Ranking 3

Research.com Recognitions

Awards & Achievements

2023 - Research.com Immunology in Denmark Leader Award

2022 - Research.com Immunology in Denmark Leader Award

Overview

What is he best known for?

The fields of study he is best known for:

  • Gene
  • Enzyme
  • Genetics

His scientific interests lie mostly in Epitope, Major histocompatibility complex, Computational biology, Genetics and Peptide binding. Morten Nielsen has researched Epitope in several fields, including Protein structure, Cytotoxic T cell and Sequence analysis. His Major histocompatibility complex study incorporates themes from Peptide sequence and Peptide.

His Computational biology study combines topics in areas such as Molecular biology, Plasma protein binding, Immune system and Bioinformatics. His research investigates the connection with Genetics and areas like Binding selectivity which intersect with concerns in Rhesus macaque. The concepts of his Peptide binding study are interwoven with issues in HLA-DR, MHC class II and Artificial intelligence.

His most cited work include:

  • Improved method for predicting linear B-cell epitopes. (848 citations)
  • Reliable prediction of T‐cell epitopes using neural networks with novel sequence representations (760 citations)
  • NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8–11 (556 citations)

What are the main themes of his work throughout his whole career to date?

Morten Nielsen focuses on Epitope, Computational biology, Major histocompatibility complex, Human leukocyte antigen and MHC class I. In his study, Immunology is strongly linked to Cytotoxic T cell, which falls under the umbrella field of Epitope. His Computational biology study integrates concerns from other disciplines, such as Immunogenicity, Molecular biology, Sequence motif, In silico and Peptide.

His Major histocompatibility complex study is concerned with the field of Genetics as a whole. His study brings together the fields of CD8 and Human leukocyte antigen. His primary area of study in MHC class I is in the field of MHC restriction.

He most often published in these fields:

  • Epitope (34.99%)
  • Computational biology (29.55%)
  • Major histocompatibility complex (26.95%)

What were the highlights of his more recent work (between 2018-2021)?

  • Computational biology (29.55%)
  • Epitope (34.99%)
  • T cell (12.77%)

In recent papers he was focusing on the following fields of study:

His main research concerns Computational biology, Epitope, T cell, Major histocompatibility complex and Immune system. The Computational biology study combines topics in areas such as Proteome, Immunogenicity, MHC class I, Peptide binding and Peptide. His Epitope research is within the category of Antigen.

Morten Nielsen usually deals with T cell and limits it to topics linked to Cytotoxic T cell and Immunology, Phenotype and Cancer research. His study in the field of MHC class II and MHC class II antigen is also linked to topics like Ligand. His work carried out in the field of Human leukocyte antigen brings together such families of science as In silico and Epitope mapping.

Between 2018 and 2021, his most popular works were:

  • Robust T Cell Immunity in Convalescent Individuals with Asymptomatic or Mild COVID-19. (477 citations)
  • NetSurfP‐2.0: Improved prediction of protein structural features by integrated deep learning (132 citations)
  • NetMHCpan-4.1 and NetMHCIIpan-4.0: improved predictions of MHC antigen presentation by concurrent motif deconvolution and integration of MS MHC eluted ligand data. (124 citations)

In his most recent research, the most cited papers focused on:

  • Gene
  • Enzyme
  • Immune system

His scientific interests lie mostly in Computational biology, Major histocompatibility complex, T cell, Epitope and Antigen presentation. His research integrates issues of Transcriptome, Genome, Gene, Disease and Omics in his study of Computational biology. His Major histocompatibility complex study necessitates a more in-depth grasp of Immune system.

His T cell research is multidisciplinary, relying on both Cytotoxic T cell, Ovarian cancer, Tumor-infiltrating lymphocytes and Cell therapy. His research in Epitope intersects with topics in Receptor, Web server and Set. His work focuses on many connections between Ligand and other disciplines, such as MHC class II, that overlap with his field of interest in Peptide binding and Antigen processing.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

Robust T Cell Immunity in Convalescent Individuals with Asymptomatic or Mild COVID-19.

Takuya Sekine;André Perez-Potti;Olga Rivera-Ballesteros;Kristoffer Strålin.
Cell (2020)

1381 Citations

Improved method for predicting linear B-cell epitopes.

Jens Erik Pontoppidan Larsen;Ole Lund;Morten Nielsen.
Immunome Research (2006)

1326 Citations

Reliable prediction of T-cell epitopes using neural networks with novel sequence representations

Morten Nielsen;Claus Lundegaard;Peder Worning;Sanne Lise Lauemøller.
Protein Science (2003)

1150 Citations

Sortilin is essential for proNGF-induced neuronal cell death

Anders Nykjaer;Ramee Lee;Kenneth K. Teng;Pernille Jansen;Pernille Jansen.
Nature (2004)

1140 Citations

NetMHCpan-4.0: Improved Peptide–MHC Class I Interaction Predictions Integrating Eluted Ligand and Peptide Binding Affinity Data

Vanessa Isabell Jurtz;Sinu Paul;Massimo Andreatta;Paolo Marcatili.
Journal of Immunology (2017)

868 Citations

BepiPred-2.0: Improving sequence-based B-cell epitope prediction using conformational epitopes

Martin Closter Jespersen;Bjoern Peters;Morten Nielsen;Paolo Marcatili.
Nucleic Acids Research (2017)

806 Citations

NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8–11

Claus Lundegaard;Kasper Lamberth;Mikkel Harndahl;Søren Buus.
Nucleic Acids Research (2008)

799 Citations

NetMHCpan, a method for MHC class I binding prediction beyond humans

Ilka Hoof;Bjoern Peters;John Sidney;Lasse Eggers Pedersen.
Immunogenetics (2009)

711 Citations

A generic method for assignment of reliability scores applied to solvent accessibility predictions

Bent Petersen;Thomas Nordahl Petersen;Pernille Andersen;Pernille Andersen;Morten Nielsen.
BMC Structural Biology (2009)

664 Citations

Large-scale validation of methods for cytotoxic T-lymphocyte epitope prediction

Mette V Larsen;Claus Lundegaard;Kasper Lamberth;Soren Buus.
BMC Bioinformatics (2007)

654 Citations

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