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Hermie J. M. Harmsen

D-Index & Metrics

Discipline name D-Index World Ranking Current World Ranking National Ranking Current National Ranking Publications Citations
Microbiology 82 1039 936 57 52 249 32668

Hermie J. M. Harmsen publications per year

The chart shows the history of publications by Hermie J. M. Harmsen between 1989 and 2025, highlighting the no. of papers published in each year and offering an overview of the publication velocity of this scholar. Hermie J. M. Harmsen published across 37 years, from 1989 to 2025, averaging 7.6 papers a year. Output peaked at 20 publications in 2022. 23 of the 281 publications appeared in the last two years.

No. of publications
5 10 15 20
Bar chart. Horizontal axis: year, 1989 to 2025. Vertical axis: number of publications, 0 to 20. Peak 20 publications in 2022. 1989: 1 publication 1990: 2 publications 1991: 2 publications 1992: 3 publications 1993: 2 publications 1994: 1 publication 1995: 5 publications 1996: 3 publications 1997: 4 publications 1998: 3 publications 1999: 2 publications 2000: 8 publications 2001: 5 publications 2002: 14 publications 2003: 8 publications 2004: 3 publications 2005: 11 publications 2006: 8 publications 2007: 4 publications 2008: 1 publication 2009: 4 publications 2010: 8 publications 2011: 5 publications 2012: 10 publications 2013: 4 publications 2014: 12 publications 2015: 7 publications 2016: 16 publications 2017: 7 publications 2018: 11 publications 2019: 15 publications 2020: 16 publications 2021: 16 publications 2022: 20 publications 2023: 17 publications 2024: 14 publications 2025: 9 publications
1989 2025

281 publications in total across all disciplines

View publications per year as a table
Hermie J. M. Harmsen: publications per year, 1989 to 2025
Year Publications
1989 1
1990 2
1991 2
1992 3
1993 2
1994 1
1995 5
1996 3
1997 4
1998 3
1999 2
2000 8
2001 5
2002 14
2003 8
2004 3
2005 11
2006 8
2007 4
2008 1
2009 4
2010 8
2011 5
2012 10
2013 4
2014 12
2015 7
2016 16
2017 7
2018 11
2019 15
2020 16
2021 16
2022 20
2023 17
2024 14
2025 9
Total 281
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Hermie J. M. Harmsen publication distribution in Microbiology in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Microbiology in 2026. The highlighted bar marks where Hermie J. M. Harmsen sits on this spectrum.

No. of scientists
50 100 150 200 250
Bar chart with 64 bars. Horizontal axis: publications, 55–64 to 679+. Vertical axis: number of scientists, 0 to 288. Most scientists, 288, have 135–144 publications. The last bar groups every scientist with 679 publications or more. The highlighted bar, 245–254 publications, is where this scientist sits. 55–64 publications: 8 scientists 65–74 publications: 29 scientists 75–84 publications: 55 scientists 85–94 publications: 112 scientists 95–104 publications: 137 scientists 105–114 publications: 190 scientists 115–124 publications: 235 scientists 125–134 publications: 234 scientists 135–144 publications: 288 scientists 145–154 publications: 265 scientists 155–164 publications: 264 scientists 165–174 publications: 253 scientists 175–184 publications: 276 scientists 185–194 publications: 190 scientists 195–204 publications: 234 scientists 205–214 publications: 208 scientists 215–224 publications: 198 scientists 225–234 publications: 155 scientists 235–244 publications: 161 scientists 245–254 publications: 160 scientists 255–264 publications: 146 scientists 265–274 publications: 139 scientists 275–284 publications: 148 scientists 285–294 publications: 115 scientists 295–304 publications: 96 scientists 305–314 publications: 88 scientists 315–324 publications: 106 scientists 325–334 publications: 65 scientists 335–344 publications: 76 scientists 345–354 publications: 64 scientists 355–364 publications: 62 scientists 365–374 publications: 65 scientists 375–384 publications: 61 scientists 385–394 publications: 34 scientists 395–404 publications: 44 scientists 405–414 publications: 36 scientists 415–424 publications: 35 scientists 425–434 publications: 29 scientists 435–444 publications: 33 scientists 445–454 publications: 34 scientists 455–464 publications: 25 scientists 465–474 publications: 26 scientists 475–484 publications: 20 scientists 485–494 publications: 19 scientists 495–504 publications: 16 scientists 505–514 publications: 17 scientists 515–524 publications: 23 scientists 525–534 publications: 14 scientists 535–544 publications: 14 scientists 545–554 publications: 18 scientists 555–564 publications: 12 scientists 565–574 publications: 7 scientists 575–584 publications: 9 scientists 585–594 publications: 9 scientists 595–604 publications: 9 scientists 605–614 publications: 7 scientists 615–624 publications: 9 scientists 625–634 publications: 7 scientists 635–644 publications: 4 scientists 645–654 publications: 5 scientists 655–664 publications: 6 scientists 665–674 publications: 7 scientists 675–678 publications: 3 scientists 679+ publications: 99 scientists
55–64 publications 679+

This scientist: 249 publications — 65th percentile

65% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 679 publications or more.

View publications distribution as a table
Number of Microbiology scientists by publication count, Research.com 2026 ranking edition. Based on 5,513 ranked scientists.
Publications Scientists This scientist
55–64 8
65–74 29
75–84 55
85–94 112
95–104 137
105–114 190
115–124 235
125–134 234
135–144 288
145–154 265
155–164 264
165–174 253
175–184 276
185–194 190
195–204 234
205–214 208
215–224 198
225–234 155
235–244 161
245–254 160 249
255–264 146
265–274 139
275–284 148
285–294 115
295–304 96
305–314 88
315–324 106
325–334 65
335–344 76
345–354 64
355–364 62
365–374 65
375–384 61
385–394 34
395–404 44
405–414 36
415–424 35
425–434 29
435–444 33
445–454 34
455–464 25
465–474 26
475–484 20
485–494 19
495–504 16
505–514 17
515–524 23
525–534 14
535–544 14
545–554 18
555–564 12
565–574 7
575–584 9
585–594 9
595–604 9
605–614 7
615–624 9
625–634 7
635–644 4
645–654 5
655–664 6
665–674 7
675–678 3
679+ 99
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Hermie J. M. Harmsen D-index placement in Microbiology in 2026

The chart shows the D-index (discipline H-index) distribution of Microbiology scientists ranked by Research.com in 2026. The highlighted bar marks where Hermie J. M. Harmsen sits on this spectrum.

No. of scientists
50 100 150
Bar chart with 88 bars. Horizontal axis: D-Index, 40 to 127+. Vertical axis: number of scientists, 0 to 162. Most scientists, 162, have 58 D-Index. The last bar groups every scientist with 127 D-Index or more. The highlighted bar, 82 D-Index, is where this scientist sits. 40 D-Index: 30 scientists 41 D-Index: 86 scientists 42 D-Index: 90 scientists 43 D-Index: 117 scientists 44 D-Index: 122 scientists 45 D-Index: 123 scientists 46 D-Index: 108 scientists 47 D-Index: 110 scientists 48 D-Index: 106 scientists 49 D-Index: 109 scientists 50 D-Index: 129 scientists 51 D-Index: 111 scientists 52 D-Index: 116 scientists 53 D-Index: 127 scientists 54 D-Index: 134 scientists 55 D-Index: 134 scientists 56 D-Index: 112 scientists 57 D-Index: 136 scientists 58 D-Index: 162 scientists 59 D-Index: 151 scientists 60 D-Index: 139 scientists 61 D-Index: 123 scientists 62 D-Index: 126 scientists 63 D-Index: 144 scientists 64 D-Index: 109 scientists 65 D-Index: 103 scientists 66 D-Index: 124 scientists 67 D-Index: 112 scientists 68 D-Index: 103 scientists 69 D-Index: 131 scientists 70 D-Index: 94 scientists 71 D-Index: 93 scientists 72 D-Index: 96 scientists 73 D-Index: 92 scientists 74 D-Index: 80 scientists 75 D-Index: 66 scientists 76 D-Index: 87 scientists 77 D-Index: 60 scientists 78 D-Index: 73 scientists 79 D-Index: 59 scientists 80 D-Index: 57 scientists 81 D-Index: 55 scientists 82 D-Index: 47 scientists 83 D-Index: 77 scientists 84 D-Index: 50 scientists 85 D-Index: 45 scientists 86 D-Index: 42 scientists 87 D-Index: 41 scientists 88 D-Index: 32 scientists 89 D-Index: 38 scientists 90 D-Index: 35 scientists 91 D-Index: 34 scientists 92 D-Index: 27 scientists 93 D-Index: 26 scientists 94 D-Index: 33 scientists 95 D-Index: 22 scientists 96 D-Index: 37 scientists 97 D-Index: 22 scientists 98 D-Index: 21 scientists 99 D-Index: 22 scientists 100 D-Index: 30 scientists 101 D-Index: 16 scientists 102 D-Index: 20 scientists 103 D-Index: 17 scientists 104 D-Index: 19 scientists 105 D-Index: 16 scientists 106 D-Index: 19 scientists 107 D-Index: 18 scientists 108 D-Index: 14 scientists 109 D-Index: 10 scientists 110 D-Index: 9 scientists 111 D-Index: 7 scientists 112 D-Index: 11 scientists 113 D-Index: 6 scientists 114 D-Index: 15 scientists 115 D-Index: 10 scientists 116 D-Index: 12 scientists 117 D-Index: 7 scientists 118 D-Index: 10 scientists 119 D-Index: 10 scientists 120 D-Index: 11 scientists 121 D-Index: 2 scientists 122 D-Index: 7 scientists 123 D-Index: 12 scientists 124 D-Index: 5 scientists 125 D-Index: 9 scientists 126 D-Index: 6 scientists 127+ D-Index: 95 scientists
40 D-Index 127+

This scientist: 82 D-Index — 81st percentile

81% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 127 D-Index or more.

View D-Index distribution as a table
Number of Microbiology scientists by D-index, Research.com 2026 ranking edition. Based on 5,513 ranked scientists.
D-Index Scientists This scientist
40 30
41 86
42 90
43 117
44 122
45 123
46 108
47 110
48 106
49 109
50 129
51 111
52 116
53 127
54 134
55 134
56 112
57 136
58 162
59 151
60 139
61 123
62 126
63 144
64 109
65 103
66 124
67 112
68 103
69 131
70 94
71 93
72 96
73 92
74 80
75 66
76 87
77 60
78 73
79 59
80 57
81 55
82 47 82
83 77
84 50
85 45
86 42
87 41
88 32
89 38
90 35
91 34
92 27
93 26
94 33
95 22
96 37
97 22
98 21
99 22
100 30
101 16
102 20
103 17
104 19
105 16
106 19
107 18
108 14
109 10
110 9
111 7
112 11
113 6
114 15
115 10
116 12
117 7
118 10
119 10
120 11
121 2
122 7
123 12
124 5
125 9
126 6
127+ 95
Download as CSV

Overview

Hermie J. M. Harmsen is affiliated with the University Medical Center Groningen in the Netherlands. Their research primarily spans the fields of Medicine and Biochemistry, Genetics, and Molecular Biology, with notable work in Molecular Biology, Epidemiology, Physiology, Infectious Diseases, and Pulmonary and Respiratory Medicine.

The main topics covered in their research include gut microbiota and health, diet and metabolism studies, oral health in cancer treatment, Clostridium difficile and Clostridium perfringens research, renal transplantation outcomes and treatments, microscopic colitis, and neutropenia and cancer infections.

Among their recent published papers are:

  • "Environmental factors shaping the gut microbiome in a Dutch population" (2022, Nature)
  • "Effect of host genetics on the gut microbiome in 7,738 participants of the Dutch Microbiome Project" (2022, Nature Genetics)
  • "Host genetic regulation of human gut microbial structural variation" (2024, Nature)
  • "Characteristics and Dysbiosis of the Gut Microbiome in Renal Transplant Recipients" (2020, Journal of Clinical Medicine)
  • "Gut microbiome dysbiosis is associated with increased mortality after solid organ transplantation" (2022, Science Translational Medicine)

The frequent coauthors working with Hermie J. M. Harmsen include:

  • Rinse K. Weersma
  • Ranko Gaćeša
  • J. Casper Swarte
  • Jingyuan Fu
  • Alexandra Zhernakova

Their research findings have been published in several recurring venues such as:

  • Research Square (Research Square)
  • bioRxiv (Cold Spring Harbor Laboratory)
  • Journal of Crohn's and Colitis
  • Frontiers in Immunology
  • Nature Communications

Best Publications

  • Short Chain Fatty Acids (SCFAs)-Mediated Gut Epithelial and Immune Regulation and Its Relevance for Inflammatory Bowel Diseases.

    Daniela Parada Venegas;Marjorie K. De la Fuente;Glauben Landskron;María Julieta González

  • Analysis of intestinal flora development in breast-fed and formula-fed infants by using molecular identification and detection methods.

    H. J. M. Harmsen;A. C. M. Wildeboer-Veloo;G. C. Raangs;A. A. Wagendorp

  • Proton pump inhibitors affect the gut microbiome

    Floris Imhann;Marc Jan Bonder;Arnau Vich Vila;Jingyuan Fu

  • Variations of Bacterial Populations in Human Feces Measured by Fluorescent In Situ Hybridization with Group-Specific 16S rRNA-Targeted Oligonucleotide Probes

    Alison H. Franks;Hermie J. M. Harmsen;Gerwin C. Raangs;Gijsbert J. Jansen

  • The Dynamics of the Human Infant Gut Microbiome in Development and in Progression toward Type 1 Diabetes

    Aleksandar D. Kostic;Aleksandar D. Kostic;Dirk Gevers;Heli Siljander;Tommi Vatanen;Tommi Vatanen

  • Analysis of the fecal microflora of human subjects consuming a probiotic product containing Lactobacillus rhamnosus DR20.

    GW Tannock;K Munro;Hermie Harmsen;GW Welling

  • Oral Biofilm Architecture on Natural Teeth

    Vincent Zijnge;M. Barbara M. van Leeuwen;John E. Degener;Frank Abbas

  • The effect of host genetics on the gut microbiome

    Marc Jan Bonder;Alexander Kurilshikov;Alexander Kurilshikov;Ettje F Tigchelaar;Zlatan Mujagic

  • Growth requirements and fermentation products of Fusobacterium prausnitzii, and a proposal to reclassify it as Faecalibacterium prausnitzii gen. nov., comb. nov.

    Sylvia H Duncan;Georgina L Hold;Hermie J M Harmsen;Colin S Stewart

  • Fecal Microbiota Composition Differs Between Children With β-Cell Autoimmunity and Those Without

    Marcus C. de Goffau;Kristiina Luopajärvi;Mikael Knip;Jorma Ilonen;Jorma Ilonen

  • Effect of host genetics on the gut microbiome in 7,738 participants of the Dutch Microbiome Project

    Unknown

  • Extensive set of 16S rRNA-based probes for detection of bacteria in human feces.

    Hermie J. M. Harmsen;Gerwin C. Raangs;Tao He;John E. Degener

  • Dehalobacter restrictus gen. nov. and sp. nov., a strictly anaerobic bacterium that reductively dechlorinates tetra- and trichloroethene in an anaerobic respiration

    Christof Holliger;Dittmar Hahn;Hermie Harmsen;Wolfgang Ludwig

  • Corrigendum: Short Chain Fatty Acids (SCFAs)-Mediated Gut Epithelial and Immune Regulation and Its Relevance for Inflammatory Bowel Diseases (Frontiers in Immunology (2019) 10 (277) DOI: 10.3389/fimmu.2019.00277)

    Daniela Parada Venegas;Marjorie K. De la Fuente;Glauben Landskron;Maria Julieta Gonzalez

  • The Role of Intestinal Microbiota in the Development and Severity of Chemotherapy-Induced Mucositis

    Michel J. van Vliet;Hermie J. M. Harmsen;Eveline S. J. M. de Bont;Wim J. E. Tissing

  • A 16S rRNA-targeted Probe for Detection of Lactobacilli and Enterococci in Faecal Samples by Fluorescent In Situ Hybridization

    Hermie J. M. Harmsen;Peter Elfferich;Frits Schut;Gjalt W. Welling

  • The role of the microbiome for human health: from basic science to clinical applications

    M. Hasan Mohajeri;M. Hasan Mohajeri;Robert J. M. Brummer;Robert A. Rastall;Rinse K. Weersma

  • Development of 16S rRNA-based probes for the Coriobacterium group and the Atopobium cluster and their application for enumeration of Coriobacteriaceae in human feces from volunteers of different age groups

    Hermie J. M. Harmsen;Alida C. M. Wildeboer-Veloo;Jan Grijpstra;Jan Knol

  • Cultured Representatives of Two Major Phylogroups of Human Colonic Faecalibacterium prausnitzii Can Utilize Pectin, Uronic Acids, and Host-Derived Substrates for Growth

    Mireia Lopez-Siles;Tanweer M. Khan;Sylvia H. Duncan;Hermie J. M. Harmsen

  • Antibiotic treatment partially protects against type 1 diabetes in the Bio-Breeding diabetes-prone rat. Is the gut flora involved in the development of type 1 diabetes?

    S. Brugman;F. A. Klatter;J. T. J. Visser;A. C. M. Wildeboer-Veloo

  • Fecal Microbiota Composition and Frailty

    Sandra P. van Tongeren;Joris P. J. Slaets;H. J. M. Harmsen;Gjalt W. Welling

  • Proton pump inhibitors affect the gut microbiome

    F. Imhann;M. J. Bonder;A. Vich Vila;J. Fu

Frequent Co-Authors

Gjalt W. Welling
Gjalt W. Welling University Medical Center Groningen
John E. Degener
John E. Degener University Medical Center Groningen
Rinse K. Weersma
Rinse K. Weersma University Medical Center Groningen
Outi Vaarala
Outi Vaarala University of Helsinki
Antoon D. L. Akkermans
Antoon D. L. Akkermans Wageningen University & Research
Harry J. Flint
Harry J. Flint University of Aberdeen
Sylvia H. Duncan
Sylvia H. Duncan University of Aberdeen
Jorma Ilonen
Jorma Ilonen University of Turku
Alfons J. M. Stams
Alfons J. M. Stams Wageningen University & Research
Jan Maarten van Dijl
Jan Maarten van Dijl University Medical Center Groningen

External Links

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Best Scientists Citing Hermie J. M. Harmsen

Willem M. de Vos

Willem M. de Vos

Wageningen University & Research

Publications: 132

Glenn R. Gibson

Glenn R. Gibson

University of Reading

Publications: 129

Harry J. Flint

Harry J. Flint

University of Aberdeen

Publications: 103

Sylvia H. Duncan

Sylvia H. Duncan

University of Aberdeen

Publications: 80

Gerald W. Tannock

Gerald W. Tannock

University of Otago

Publications: 72

Kieran M. Tuohy

Kieran M. Tuohy

Fondazione Edmund Mach

Publications: 65

Alfons J. M. Stams

Alfons J. M. Stams

Wageningen University & Research

Publications: 63

Joël Doré

Joël Doré

INRAE : Institut national de recherche pour l'agriculture, l'alimentation et l'environnement

Publications: 61

Robert A. Rastall

Robert A. Rastall

University of Reading

Publications: 60

Seppo Salminen

Seppo Salminen

University of Turku

Publications: 59

Jan Maarten van Dijl

Jan Maarten van Dijl

University Medical Center Groningen

Publications: 58

Hauke Smidt

Hauke Smidt

Wageningen University & Research

Publications: 52

Ramnik J. Xavier

Ramnik J. Xavier

Broad Institute

Publications: 49

Curtis Huttenhower

Curtis Huttenhower

Harvard University

Publications: 46

Petra Louis

Petra Louis

University of Aberdeen

Publications: 45

Erika Isolauri

Erika Isolauri

University of Turku

Publications: 44

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