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Genetics
Sweden
2026
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Molecular Biology
Sweden
2025

D-Index & Metrics

Genetics

D-Index
101
Citations
49691
World Ranking
717
National Ranking
9

Molecular Biology

D-Index
101
Citations
49691
World Ranking
503
National Ranking
11

Research.com Recognitions

  • 2026 - Research.com Genetics in Sweden Leader Award
  • 2025 - Research.com Genetics in Sweden Leader Award
  • 2025 - Research.com Molecular Biology in Sweden Leader Award
  • 2024 - Research.com Genetics in Sweden Leader Award
  • 2023 - Research.com Genetics in Sweden Leader Award

Overview

Joakim Lundeberg is affiliated with the Royal Institute of Technology in Sweden, contributing primarily to research in the fields of Biochemistry, Genetics and Molecular Biology, and Medicine.

Their work spans across significant subfields including Molecular Biology, Immunology, Pulmonary and Respiratory Medicine, Cancer Research, and Oncology. The main topics within their research focus include Single-cell and spatial transcriptomics, Molecular Biology Techniques and Applications, Cell Image Analysis Techniques, Cancer Genomics and Diagnostics, Gene expression and cancer classification, Immune cells in cancer, and Cancer Cells and Metastasis.

Joakim Lundeberg has been involved in multiple publications, notably with the following papers:

  • SARS-CoV-2 Receptor ACE2 Is an Interferon-Stimulated Gene in Human Airway Epithelial Cells and Is Detected in Specific Cell Subsets across Tissues, 2020, Cell
  • A single-cell and spatially resolved atlas of human breast cancers, 2021, Nature Genetics
  • Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma, 2020, Cell
  • Spatial Transcriptomics and In Situ Sequencing to Study Alzheimer's Disease, 2020, Cell
  • Spatially Resolved Transcriptomes-Next Generation Tools for Tissue Exploration, 2020, BioEssays

The scientist frequently publishes in the following venues:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Zenodo (CERN European Organization for Nuclear Research)
  • Nature Communications
  • Cancer Research
  • Cell

Collaborations are a notable aspect of their research activity. Frequent co-authors include Ludvig Larsson, Alma Andersson, Kim Thrane, Joseph Bergenstråhle, and Mengxiao He.

Best Publications

  • Visualization and analysis of gene expression in tissue sections by spatial transcriptomics

    Patrik L. Ståhl;Patrik L. Ståhl;Fredrik Salmen;Sanja Vickovic;Anna Lundmark;Anna Lundmark

  • SARS-CoV-2 Receptor ACE2 Is an Interferon-Stimulated Gene in Human Airway Epithelial Cells and Is Detected in Specific Cell Subsets across Tissues.

    Carly G.K. Ziegler;Samuel J. Allon;Sarah K. Nyquist;Ian M. Mbano

  • A Human Protein Atlas for Normal and Cancer Tissues Based on Antibody Proteomics

    Mathias Uhlén;Erik Björling;Charlotta Agaton;Cristina Al-Khalili Szigyarto

  • The Norway spruce genome sequence and conifer genome evolution.

    Björn Nystedt;Nathaniel Robert Street;Anna Wetterbom;Andrea Zuccolo

  • The Human Cell Atlas

    Aviv Regev;Aviv Regev;Aviv Regev;Sarah A Teichmann;Sarah A Teichmann;Sarah A Teichmann;Eric S Lander;Eric S Lander;Eric S Lander;Ido Amit

  • Multiple and Ancient Origins of the Domestic Dog

    Carles Vilà;Peter Savolainen;Jesús E. Maldonado;Isabel R. Amorim

  • Genetic Evidence for an East Asian Origin of Domestic Dogs

    Peter Savolainen;Ya-ping Zhang;Jing Luo;Joakim Lundeberg

  • A single-cell and spatially resolved atlas of human breast cancers.

    Sunny Z. Wu;Sunny Z. Wu;Ghamdan Al-Eryani;Ghamdan Al-Eryani;Daniel Lee Roden;Daniel Lee Roden;Simon Junankar;Simon Junankar

  • High-definition spatial transcriptomics for in situ tissue profiling.

    Sanja Vickovic;Sanja Vickovic;Gökcen Eraslan;Fredrik Salmén;Johanna Klughammer

  • Spatial Transcriptomics and In Situ Sequencing to Study Alzheimer's Disease.

    Wei-Ting Chen;Wei-Ting Chen;Ashley Lu;Ashley Lu;Katleen Craessaerts;Katleen Craessaerts;Benjamin Pavie

  • Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma.

    Andrew L. Ji;Adam J. Rubin;Kim Thrane;Sizun Jiang

  • A Spatiotemporal Organ-Wide Gene Expression and Cell Atlas of the Developing Human Heart

    Michaela Asp;Stefania Giacomello;Ludvig Larsson;Chenglin Wu

  • Single-Nucleotide Polymorphism Analysis by Pyrosequencing

    Afshin Ahmadian;Baback Gharizadeh;Anna C. Gustafsson;Fredrik Sterky

  • The biotin-streptavidin interaction can be reversibly broken using water at elevated temperatures

    Anders Holmberg;Anna Blomstergren;Olof Nord;Morten Lukacs

  • A transcriptional roadmap to wood formation

    Magnus Hertzberg;Henrik Aspeborg;Jarmo Schrader;Anders Andersson

  • A high frequency of sequence alterations is due to formalin fixation of archival specimens.

    Cecilia Williams;Fredrik Pontén;Catherine Moberg;Peter Söderkvist

  • Gene discovery in the wood-forming tissues of poplar: Analysis of 5,692 expressed sequence tags

    F Sterky;S Regan;Jan Karlsson;M Hertzberg

  • Generations of sequencing technologies.

    Erik Pettersson;Joakim Lundeberg;Afshin Ahmadian

  • A hypoxic niche regulates glioblastoma stem cells through hypoxia inducible factor 2α

    Sascha Seidel;Boyan K. Garvalov;Valtteri Wirta;Louise von Stechow

  • Technical Advance A High Frequency of Sequence Alterations Is Due to Formalin Fixation of Archival Specimens

    Cecilia Williams;Gisela Sitbon;Joakim Lundeberg

Frequent Co-Authors

Mathias Uhlén
Mathias Uhlén Royal Institute of Technology
Fredrik Pontén
Fredrik Pontén Uppsala University
Peter Nilsson
Peter Nilsson Royal Institute of Technology
Jonas Frisén
Jonas Frisén Karolinska Institute
Johan Hansson
Johan Hansson Karolinska Institute
Aviv Regev
Aviv Regev Genentech
Rishikesh P. Bhalerao
Rishikesh P. Bhalerao Swedish University of Agricultural Sciences
Jan Albert
Jan Albert Karolinska Institute
Jan Pontén
Jan Pontén Uppsala University
Anders Holmberg
Anders Holmberg Newcastle University

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