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Molecular Biology

D-Index
52
Citations
54611
World Ranking
2402
National Ranking
1185

Overview

Aron Marchler-Bauer is affiliated with the National Institutes of Health in the United States and focuses research efforts in the broad field of Biochemistry, Genetics, and Molecular Biology. Their work has contributed extensively to Molecular Biology, with notable involvement in related subfields such as Materials Chemistry, Infectious Diseases, Spectroscopy, and Information Systems and Management.

The scientist's research spans several major topics, including:

  • Genomics and Phylogenetic Studies
  • Genetics, Bioinformatics, and Biomedical Research
  • Molecular Biology Techniques and Applications
  • RNA and protein synthesis mechanisms
  • Machine Learning in Bioinformatics
  • Protein Structure and Dynamics
  • Enzyme Structure and Function

Aron Marchler-Bauer has published in a variety of scientific venues, primarily focusing on contributions to Nucleic Acids Research, where there are at least eleven publications attributed to them. Other publication venues include Database, bioRxiv (Cold Spring Harbor Laboratory), Frontiers in Molecular Biosciences, and BMC Genomics.

The following recent papers illustrate the scientist's research interests and collaborations:

  • Database resources of the national center for biotechnology information, 2021, Nucleic Acids Research
  • InterPro in 2022, 2022, Nucleic Acids Research
  • The InterPro protein families and domains database: 20 years on, 2020, Nucleic Acids Research
  • RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation, 2020, Nucleic Acids Research
  • The conserved domain database in 2023, 2022, Nucleic Acids Research

Collaboration forms an important aspect of their work, with frequent co-authors being:

  • Christopher J. Lanczycki
  • Jiyao Wang
  • Terence D. Murphy
  • Kim D. Pruitt
  • J. Rodney Brister

Aron Marchler-Bauer's research outputs have contributed to widely utilized resources within molecular biology and bioinformatics, reflecting interdisciplinary approaches combining genomics, protein family database curation, and computational methods.

Best Publications

  • CDD: NCBI's conserved domain database

    Aron Marchler-Bauer;Myra K. Derbyshire;Noreen R. Gonzales;Shennan Lu

  • CDD: a Conserved Domain Database for the functional annotation of proteins

    Aron Marchler-Bauer;Shennan Lu;John B. Anderson;Farideh Chitsaz

  • CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.

    Aron Marchler-Bauer;Yu Bo;Lianyi Han;Jane He

  • CD-Search: protein domain annotations on the fly

    Aron Marchler-Bauer;Stephen H. Bryant

  • CDD/SPARCLE: the conserved domain database in 2020

    Unknown

  • The InterPro protein families and domains database: 20 years on.

    Matthias Blum;Hsin Yu Chang;Sara Chuguransky;Tiago Grego

  • InterPro in 2017-beyond protein family and domain annotations

    Robert D. Finn;Teresa K. Attwood;Patricia C. Babbitt;Alex Bateman

  • InterPro in 2019: improving coverage, classification and access to protein sequence annotations.

    Alex L. Mitchell;Teresa K. Attwood;Patricia C. Babbitt;Matthias Blum

  • CDD: a Conserved Domain Database for protein classification

    Aron Marchler-Bauer;John B. Anderson;Praveen F. Cherukuri;Carol DeWeese-Scott

  • CDD: specific functional annotation with the Conserved Domain Database.

    Aron Marchler-Bauer;John B. Anderson;Farideh Chitsaz;Myra K. Derbyshire

  • THE SACCHAROMYCES CEREVISIAE ZINC FINGER PROTEINS MSN2P AND MSN4P ARE REQUIRED FOR TRANSCRIPTIONAL INDUCTION THROUGH THE STRESS-RESPONSE ELEMENT (STRE )

    Unknown

  • CDD: a conserved domain database for interactive domain family analysis

    Aron Marchler-Bauer;John B. Anderson;Myra K. Derbyshire;Carol DeWeese-Scott

  • CDD: conserved domains and protein three-dimensional structure

    Aron Marchler-Bauer;Chanjuan Zheng;Farideh Chitsaz;Myra K. Derbyshire

  • CDD: a curated Entrez database of conserved domain alignments

    Aron Marchler-Bauer;John B. Anderson;Carol DeWeese-Scott;Natalie D. Fedorova

  • RefSeq: an update on prokaryotic genome annotation and curation.

    Daniel H Haft;Michael DiCuccio;Azat Badretdin;Vyacheslav Brover

  • CDD: a database of conserved domain alignments with links to domain three-dimensional structure

    Aron Marchler-Bauer;Anna R. Panchenko;Benjamin A. Shoemaker;Paul A. Thiessen

  • RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation

    Wenjun Li;Kathleen R O’Neill;Daniel H Haft;Michael DiCuccio

  • MMDB and VAST+: tracking structural similarities between macromolecular complexes

    Thomas Madej;Christopher J. Lanczycki;Dachuan Zhang;Paul A. Thiessen

  • Domain size distributions can predict domain boundaries

    Sarah J. Wheelan;Aron Marchler-Bauer;Stephen H. Bryant

  • Structural requirements for low-pH-induced rearrangements in the envelope glycoprotein of tick-borne encephalitis virus.

    K Stiasny;S L Allison;A Marchler-Bauer;C Kunz

Frequent Co-Authors

Stephen H. Bryant
Stephen H. Bryant National Institutes of Health
Anna R. Panchenko
Anna R. Panchenko Queen's University
Robert D. Finn
Robert D. Finn European Bioinformatics Institute
Ivica Letunic
Ivica Letunic European Bioinformatics Institute
Silvio C. E. Tosatto
Silvio C. E. Tosatto University of Padua
Julian Gough
Julian Gough University of Bristol
Paul D. Thomas
Paul D. Thomas University of Southern California
Peer Bork
Peer Bork European Molecular Biology Laboratory
Christine A. Orengo
Christine A. Orengo University College London
Daniel H. Haft
Daniel H. Haft National Institutes of Health

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