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D-Index & Metrics

Molecular Biology

D-Index
60
Citations
15502
World Ranking
1941
National Ranking
965

Overview

W. Hayes McDonald is affiliated with Vanderbilt University in the United States and specializes in the fields of Biochemistry, Genetics and Molecular Biology, as well as Medicine. Their research spans across various subfields, including Molecular Biology, Immunology, Surgery, Cell Biology, and Infectious Diseases.

The main topics addressed in their work include:

  • Helicobacter pylori-related gastroenterology studies
  • Galectins and Cancer Biology
  • RNA Research and Splicing
  • RNA modifications and cancer
  • Genomics and Chromatin Dynamics
  • Cell Adhesion Molecules Research
  • Viral Infections and Outbreaks Research

The scientist has published extensively, with notable recent papers including:

  • Discovery of Widespread Host Protein Interactions with the Pre-replicated Genome of CHIKV Using VIR-CLASP, 2020, Molecular Cell
  • DDR1 contributes to kidney inflammation and fibrosis by promoting the phosphorylation of BCR and STAT3, 2021, JCI Insight
  • Therapeutic alphavirus cross-reactive E1 human antibodies inhibit viral egress, 2021, Cell
  • PAX3-FOXO1 coordinates enhancer architecture, eRNA transcription, and RNA polymerase pause release at select gene targets, 2022, Molecular Cell
  • Delineation of the pH-Responsive Regulon Controlled by the Helicobacter pylori ArsRS Two-Component System, 2021, Infection and Immunity

Frequent co-authors collaborating with W. Hayes McDonald include:

  • Timothy L. Cover
  • Kevin L. Schey
  • Kaeli N. Bryant
  • Kristie L. Rose
  • Mark S. McClain

Their work has appeared in multiple publication venues with several contributions in:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Infection and Immunity
  • Proceedings of the National Academy of Sciences
  • Molecular Cell
  • Life Science Alliance

Best Publications

  • Role of Rpn11 Metalloprotease in Deubiquitination and Degradation by the 26S Proteasome

    Rati Verma;L. Aravind;Robert Oania;W. Hayes McDonald

  • Phytophthora Genome Sequences Uncover Evolutionary Origins and Mechanisms of Pathogenesis

    Brett M. Tyler;Sucheta Tripathy;Xuemin Zhang;Paramvir Dehal;Paramvir Dehal

  • Sirt3-Mediated Deacetylation of Evolutionarily Conserved Lysine 122 Regulates MnSOD Activity in Response to Stress

    Randa Tao;Mitchell C. Coleman;J. Daniel Pennington;Ozkan Ozden

  • Shotgun identification of protein modifications from protein complexes and lens tissue

    Michael J. MacCoss;W. Hayes McDonald;Anita Saraf;Rovshan Sadygov

  • Mus81-Eme1 Are Essential Components of a Holliday Junction Resolvase

    Michael N. Boddy;Pierre-Henri L. Gaillard;W.Hayes McDonald;Paul Shanahan

  • Cln3 activates G1-specific transcription via phosphorylation of the SBF bound repressor Whi5.

    Robertus A.M de Bruin;W.Hayes McDonald;Tatyana I Kalashnikova;John Yates

  • Shotgun Proteomics and Biomarker Discovery

    W. Hayes McDonald;John R. Yates

  • MS1, MS2, and SQT—three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications

    W. Hayes McDonald;David L. Tabb;David L. Tabb;Rovshan G. Sadygov;Michael J. MacCoss

  • Comparison of three directly coupled HPLC MS/MS strategies for identification of proteins from complex mixtures: single-dimension LC-MS/MS, 2-phase MudPIT, and 3-phase MudPIT

    W.Hayes McDonald;Ryoma Ohi;David T Miyamoto;Timothy J Mitchison

  • Staphylococcus aureus Fur Regulates the Expression of Virulence Factors That Contribute to the Pathogenesis of Pneumonia

    Victor J. Torres;Ahmed S. Attia;William J. Mason;M. Indriati Hood

  • Assigning Function to Yeast Proteins by Integration of Technologies

    Tony R. Hazbun;Lars Malmström;Scott Anderson;Beth J. Graczyk

  • Identification of Proteins at Active, Stalled, and Collapsed Replication Forks Using Isolation of Proteins on Nascent DNA (iPOND) Coupled with Mass Spectrometry

    Bianca M. Sirbu;W. Hayes McDonald;Huzefa Dungrawala;Akosua Badu-Nkansah

  • Tea4p Links Microtubule Plus Ends with the Formin For3p in the Establishment of Cell Polarity

    Sophie G. Martin;W. Hayes McDonald;John R. Yates;Fred Chang

  • Azospirillum genomes reveal transition of bacteria from aquatic to terrestrial environments.

    Florence Wisniewski-Dyé;Kirill Borziak;Gurusahai Khalsa-Moyers;Gladys Alexandre

  • Proteomics Analysis Reveals Stable Multiprotein Complexes in Both Fission and Budding Yeasts Containing Myb-Related Cdc5p/Cef1p, Novel Pre-mRNA Splicing Factors, and snRNAs

    Melanie D. Ohi;Andrew J. Link;Liping Ren;Jennifer L. Jennings

  • Automatic Quality Assessment of Peptide Tandem Mass Spectra

    Marshall Bern;David Goldberg;W. Hayes Mcdonald;John R. Yates

  • Swi1 and Swi3 Are Components of a Replication Fork Protection Complex in Fission Yeast

    Eishi Noguchi;Chiaki Noguchi;W. Hayes McDonald;John R. Yates

  • Carcinoma and stromal enzyme activity profiles associated with breast tumor growth in vivo

    Nadim Jessani;Mark Humphrey;W. Hayes McDonald;Sherry Niessen

  • The evolutionary imprint of domestication on genome variation and function of the filamentous fungus Aspergillus oryzae.

    John G. Gibbons;Leonidas Salichos;Jason C. Slot;David C. Rinker

  • Proteolysis-independent regulation of the transcription factor Met4 by a single Lys 48-linked ubiquitin chain

    Karin Flick;Ikram Ouni;James A. Wohlschlegel;Chrissy Capati

Frequent Co-Authors

John R. Yates
John R. Yates Scripps Research Institute
Timothy L. Cover
Timothy L. Cover Vanderbilt University Medical Center
Kathleen L. Gould
Kathleen L. Gould Vanderbilt University
Paul Russell
Paul Russell Scripps Research Institute
Dale A. Pelletier
Dale A. Pelletier Oak Ridge National Laboratory
David L. Tabb
David L. Tabb Stellenbosch University
Gary Cecchini
Gary Cecchini University of California, San Francisco
Nathan C Verberkmoes
Nathan C Verberkmoes Oak Ridge National Laboratory
Heidi E. Hamm
Heidi E. Hamm Vanderbilt University
Kurt Lamour
Kurt Lamour University of Tennessee at Knoxville

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