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D-Index & Metrics

Molecular Biology

D-Index
49
Citations
9079
World Ranking
2633
National Ranking
1286

Overview

Paul S. Knoepfler is affiliated with the University of California, Davis in the United States. Their research spans multiple fields with a strong focus on biochemistry, genetics, and molecular biology. Their body of work intersects significantly with medicine, encompassing areas such as molecular biology, genetics, physiology, rheumatology, and immunology.

Their research topics include glioma diagnosis and treatment, genomics and chromatin dynamics, epigenetics and DNA methylation, CRISPR and genetic engineering, RNA regulation and disease, genetics and neurodevelopmental disorders, and nuclear structure and function.

Notable recent publications include:

  • Reciprocal H3.3 gene editing identifies K27M and G34R mechanisms in pediatric glioma including NOTCH signaling (2020, Communications Biology)
  • Histone H3.3 K27M chromatin functions implicate a network of neurodevelopmental factors including ASCL1 and NEUROD1 in DIPG (2022, Epigenetics & Chromatin)
  • Knockout tales: the versatile roles of histone H3.3 in development and disease (2023, Epigenetics & Chromatin)
  • DPPA2, DPPA4, and other DPPA factor epigenomic functions in cell fate and cancer (2021, Stem Cell Reports)
  • Noncanonical function of folate through folate receptor 1 during neural tube formation (2024, Nature Communications)

Their frequent coauthors are:

  • Rachel Herndon Klein
  • Nichole Lewis
  • Jennifer Yee
  • Kelly Bush
  • Vanessa Cervantes

They have published regularly in these scientific venues:

  • Epigenetics & Chromatin
  • Communications Biology
  • Stem Cell Reports
  • Nature Communications
  • Frontiers in Cell and Developmental Biology

Paul S. Knoepfler's work covers a range of critical topics in genetics and molecular biology, with an emphasis on epigenetic regulation mechanisms and their implications in cancer and neurodevelopmental disorders. Their research draws from and contributes to an interdisciplinary landscape combining molecular biology techniques with clinical insights.

Best Publications

  • N-myc is essential during neurogenesis for the rapid expansion of progenitor cell populations and the inhibition of neuronal differentiation.

    Paul S. Knoepfler;Pei Feng Cheng;Robert N. Eisenman

  • Deconstructing Stem Cell Tumorigenicity: A Roadmap to Safe Regenerative Medicine

    Paul S. Knoepfler;Paul S. Knoepfler

  • Sin meets NuRD and other tails of repression

    Paul S Knoepfler;Robert N Eisenman

  • Myc influences global chromatin structure.

    Paul S Knoepfler;Xiao Yong Zhang;Pei Feng Cheng;Philip R. Gafken

  • Pbx marks genes for activation by MyoD indicating a role for a homeodomain protein in establishing myogenic potential.

    Charlotte A Berkes;Donald A Bergstrom;Donald A Bergstrom;Bennett H Penn;Karen J Seaver

  • Hematopoietic Stem Cell Function and Survival Depend on c-Myc and N-Myc Activity

    Elisa Laurenti;Barbara Varnum-Finney;Anne Wilson;Isabel Ferrero

  • Selling Stem Cells in the USA: Assessing the Direct-to-Consumer Industry

    Leigh Turner;Paul S Knoepfler;Paul S Knoepfler

  • Nmyc plays an essential role during lung development as a dosage-sensitive regulator of progenitor cell proliferation and differentiation.

    Tadashi Okubo;Paul S. Knoepfler;Robert N. Eisenman;Brigid L. M. Hogan

  • Meis1 and pKnox1 bind DNA cooperatively with Pbx1 utilizing an interaction surface disrupted in oncoprotein E2a-Pbx1

    Paul S. Knoepfler;Katherine R. Calvo;Haiming Chen;Stylianos E. Antonarakis

  • THE PENTAPEPTIDE MOTIF OF HOX PROTEINS IS REQUIRED FOR COOPERATIVE DNA BINDING WITH PBX1, PHYSICALLY CONTACTS PBX1, AND ENHANCES DNA BINDING BY PBX1

    Paul S Knoepfler;M. P. Kamps

  • N-myc Is an Essential Downstream Effector of Shh Signaling during both Normal and Neoplastic Cerebellar Growth

    Beryl A. Hatton;Paul S. Knoepfler;Anna Marie Kenney;David H. Rowitch

  • Both Pbx1 and E2A-Pbx1 bind the DNA motif ATCAATCAA cooperatively with the products of multiple murine Hox genes, some of which are themselves oncogenes.

    Q. Lu;Paul S Knoepfler;J. Scheele;D. D. Wright

  • Myc goes global: new tricks for an old oncogene.

    Paul S. Knoepfler

  • myc maintains embryonic stem cell pluripotency and self-renewal.

    Natalia V. Varlakhanova;Rebecca F. Cotterman;Rebecca F. Cotterman;Wilhelmine N. deVries;Judy Morgan

  • N-Myc Regulates a Widespread Euchromatic Program in the Human Genome Partially Independent of Its Role as a Classical Transcription Factor

    Rebecca Cotterman;Rebecca Cotterman;Victor X. Jin;Victor X. Jin;Sheryl R. Krig;Jessica M. Lemen

  • Division and apoptosis of E2f-deficient retinal progenitors

    Danian Chen;Marek Pacal;Pamela Wenzel;Paul S. Knoepfler

  • The Smad transcriptional corepressor TGIF recruits mSin3.

    David Wotton;Paul S. Knoepfler;Carol D. Laherty;Robert N. Eisenman

  • Histone H3.3 mutations: a variant path to cancer.

    Benjamin T.K. Yuen;Paul S. Knoepfler

  • Why Myc? An Unexpected Ingredient in the Stem Cell Cocktail

    Paul S. Knoepfler;Paul S. Knoepfler

  • Histone H3.3 regulates dynamic chromatin states during spermatogenesis.

    Benjamin T. K. Yuen;Kelly M. Bush;Bonnie L. Barrilleaux;Rebecca Cotterman

Frequent Co-Authors

Robert N. Eisenman
Robert N. Eisenman Fred Hutchinson Cancer Research Center
Mark P. Kamps
Mark P. Kamps University of California, San Diego
Verónica Martínez-Cerdeño
Verónica Martínez-Cerdeño University of California, Davis
Stephen J. Tapscott
Stephen J. Tapscott Fred Hutchinson Cancer Research Center
Lionel Larue
Lionel Larue University of Paris-Saclay
Andreas Trumpp
Andreas Trumpp German Cancer Research Center
Yukiko Gotoh
Yukiko Gotoh University of Tokyo
Victor X. Jin
Victor X. Jin Medical College of Wisconsin
Martine F. Roussel
Martine F. Roussel St. Jude Children's Research Hospital
David E Pleasure
David E Pleasure University of California, Davis

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