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Overview

Nicole Redaschi is affiliated with the Swiss Institute of Bioinformatics in Switzerland. Their research spans multiple disciplines within biochemistry, genetics, molecular biology, and computer science, focusing notably on molecular biology and artificial intelligence.

The primary fields of study associated with their work include:

  • Biochemistry, Genetics and Molecular Biology
  • Computer Science

Subfields of particular interest are:

  • Molecular Biology
  • Artificial Intelligence
  • Biophysics
  • Spectroscopy
  • Information Systems

Nicole Redaschi's publications frequently appear in prominent scientific journals. The most common venues include:

  • Nucleic Acids Research
  • Bioinformatics
  • GigaScience
  • Bioinformatics Advances
  • Faculty of 1000 Research Ltd

Their recent papers from 2020 through 2024 comprise:

  • UniProt: the universal protein knowledgebase in 2021 (2020, Nucleic Acids Research)
  • UniProt: the Universal Protein Knowledgebase in 2023 (2022, Nucleic Acids Research)
  • UniProt: the Universal Protein Knowledgebase in 2025 (2024, Nucleic Acids Research)
  • Annotation of biologically relevant ligands in UniProtKB using ChEBI (2022, Bioinformatics)
  • Rhea, the reaction knowledgebase in 2022 (2021, Nucleic Acids Research)

The topics addressed in these works predominantly cover areas such as:

  • Biomedical Text Mining and Ontologies
  • Bioinformatics and Genomic Networks
  • Genomics and Phylogenetic Studies
  • Cell Image Analysis Techniques
  • Advanced Proteomics Techniques and Applications
  • Microbial Metabolic Engineering and Bioproduction
  • Semantic Web and Ontologies

Nicole Redaschi's collaborative efforts are evident from frequent co-authorships with researchers including:

  • Alan Bridge
  • Jerven Bolleman
  • Elisabeth Coudert
  • Elisabeth Gasteiger
  • Edouard de Castro

Best Publications

  • UniProt: A hub for protein information

    Alex Bateman;Maria Jesus Martin;Claire O'Donovan;Michele Magrane

  • UniProt: the Universal Protein knowledgebase

    Rolf Apweiler;Amos Bairoch;Cathy H. Wu;Winona C. Barker

  • UniProt: the universal protein knowledgebase in 2021

    Alex Bateman;Maria-Jesus Martin;Sandra Orchard

  • The Universal Protein Resource (UniProt)

    Amos Bairoch;Rolf Apweiler;Cathy H. Wu;Winona C. Barker

  • Activities at the Universal Protein Resource (UniProt)

    R Apweiler;A Bateman;MJ Martin;C O'Donovan

  • ExPASy: SIB bioinformatics resource portal.

    Panu Artimo;Manohar Jonnalagedda;Konstantin Arnold;Delphine Baratin

  • InterPro in 2017-beyond protein family and domain annotations

    Robert D. Finn;Teresa K. Attwood;Patricia C. Babbitt;Alex Bateman

  • InterPro in 2019: improving coverage, classification and access to protein sequence annotations.

    Alex L. Mitchell;Teresa K. Attwood;Patricia C. Babbitt;Matthias Blum

  • The InterPro protein families database: the classification resource after 15 years

    Alex L. Mitchell;Hsin-Yu Chang;Louise C. Daugherty;Matthew Fraser

  • The Universal Protein Resource (UniProt): an expanding universe of protein information

    Cathy H. Wu;Rolf Apweiler;Amos Bairoch;Darren A. Natale

  • Ongoing and future developments at the Universal Protein Resource

    Anne Morgat;Rolf Apweiler;Maria-Jesus Martin;C. O'Donovan

  • The Universal Protein Resource (UniProt) in 2010

    R Apweiler;MJ Martin;C O'Donovan;M Magrane

  • Infrastructure for the life sciences: design and implementation of the UniProt website

    Eric Jain;Amos Bairoch;Amos Bairoch;Severine Duvaud;Isabelle Phan

  • The EBI RDF Platform: Linked Open Data for the Life Sciences

    Simon Jupp;James Malone;Jerven T. Bolleman;Marco Brandizi

  • The UniProtKB guide to the human proteome

    Lionel Breuza;Sylvain Poux;Anne Estreicher;Maria Livia Famiglietti

  • Rhea, the reaction knowledgebase in 2022.

    Parit Bansal;Anne Morgat;Kristian B Axelsen;Venkatesh Muthukrishnan

  • HAMAP in 2015: updates to the protein family classification and annotation system

    Ivo Pedruzzi;Catherine Rivoire;Andrea H. Auchincloss;Elisabeth Coudert

  • Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research.

    Franziska Hufsky;Kevin Lamkiewicz;Alexandre Almeida;Abdel Aouacheria

  • Enzyme annotation in UniProtKB using Rhea.

    Anne Morgat;Thierry Lombardot;Elisabeth Coudert;Kristian B. Axelsen

  • HAMAP in 2013, new developments in the protein family classification and annotation system

    Ivo Pedruzzi;Catherine Rivoire;Andrea H. Auchincloss;Elisabeth Coudert

Frequent Co-Authors

Alan Bridge
Alan Bridge Swiss Institute of Bioinformatics
Ioannis Xenarios
Ioannis Xenarios University of Lausanne
Elisabeth Gasteiger
Elisabeth Gasteiger Swiss Institute of Bioinformatics
Maria Jesus Martin
Maria Jesus Martin European Bioinformatics Institute
Rodrigo Lopez
Rodrigo Lopez European Bioinformatics Institute
Hongzhan Huang
Hongzhan Huang University of Delaware
Lydie Bougueleret
Lydie Bougueleret Swiss Institute of Bioinformatics
Cathy H. Wu
Cathy H. Wu University of Delaware
Amos Marc Bairoch
Amos Marc Bairoch Swiss Institute of Bioinformatics
Rolf Apweiler
Rolf Apweiler European Bioinformatics Institute

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