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Molecular Biology

D-Index
49
Citations
56593
World Ranking
2586
National Ranking
46

Overview

Alan Bridge is affiliated with the Swiss Institute of Bioinformatics in Switzerland. Their research primarily spans the fields of Biochemistry, Genetics, and Molecular Biology, with a particular emphasis on Molecular Biology. Additional subfields of study include Artificial Intelligence, Spectroscopy, Computational Theory and Mathematics, and Materials Chemistry.

The scientist's main research topics include Genomics and Phylogenetic Studies, Bioinformatics and Genomic Networks, Biomedical Text Mining and Ontologies, Advanced Proteomics Techniques and Applications, Machine Learning in Bioinformatics, Microbial Metabolic Engineering and Bioproduction, and Computational Drug Discovery Methods.

Alan Bridge has published extensively in several academic venues, with the most frequent publication venues as follows:

  • Nucleic Acids Research (11 publications)
  • Bioinformatics (3 publications)
  • Database (2 publications)
  • Metabolomics (2 publications)
  • GigaScience (2 publications)

Recent papers contributing to their field include:

  • UniProt: the universal protein knowledgebase in 2021, 2020, Nucleic Acids Research
  • UniProt: the Universal Protein Knowledgebase in 2023, 2022, Nucleic Acids Research
  • InterPro in 2022, 2022, Nucleic Acids Research
  • The Gene Ontology knowledgebase in 2023, 2023, Genetics
  • The InterPro protein families and domains database: 20 years on, 2020, Nucleic Acids Research

Frequent co-authors in their research projects include:

  • Nicole Redaschi
  • Jerven Bolleman
  • Alex Bateman
  • Elisabeth Coudert
  • Anne Morgat

Best Publications

  • UniProt: A hub for protein information

    Alex Bateman;Maria Jesus Martin;Claire O'Donovan;Michele Magrane

  • UniProt: the universal protein knowledgebase in 2021

    Alex Bateman;Maria-Jesus Martin;Sandra Orchard

  • The Gene Ontology resource: enriching a GOld mine

    Seth Carbon;Eric Douglass;Benjamin M Good

  • Activities at the Universal Protein Resource (UniProt)

    R Apweiler;A Bateman;MJ Martin;C O'Donovan

  • The InterPro protein families and domains database: 20 years on.

    Matthias Blum;Hsin Yu Chang;Sara Chuguransky;Tiago Grego

  • InterPro in 2017-beyond protein family and domain annotations

    Robert D. Finn;Teresa K. Attwood;Patricia C. Babbitt;Alex Bateman

  • New and continuing developments at PROSITE

    Christian J. A. Sigrist;Edouard de Castro;Lorenzo Cerutti;Béatrice A. Cuche

  • InterPro in 2019: improving coverage, classification and access to protein sequence annotations.

    Alex L. Mitchell;Teresa K. Attwood;Patricia C. Babbitt;Matthias Blum

  • Induction of an interferon response by RNAi vectors in mammalian cells

    Alan J Bridge;Stephanie Pebernard;Annick Ducraux;Anne-Laure Nicoulaz

  • Ongoing and future developments at the Universal Protein Resource

    Anne Morgat;Rolf Apweiler;Maria-Jesus Martin;C. O'Donovan

  • IntAct—open source resource for molecular interaction data

    Samuel Kerrien;Yasmin Alam-Faruque;Bruno Aranda;I. Bancarz

  • The Universal Protein Resource (UniProt) in 2010

    R Apweiler;MJ Martin;C O'Donovan;M Magrane

  • UniProtKB/Swiss-Prot, the Manually Annotated Section of the UniProt KnowledgeBase: How to Use the Entry View.

    Emmanuel Boutet;Damien Lieberherr;Michael Tognolli;Michel Schneider

  • Gene ontology annotations and resources

    Blake Ja;Dolan M;Drabkin H

  • Protein interaction data curation: the International Molecular Exchange (IMEx) consortium

    Sandra Orchard;Samuel Kerrien;Sara Abbani;Bruno Aranda

  • The UniProt-GO Annotation database in 2011

    Emily C. Dimmer;Rachael P. Huntley;Yasmin Alam-Faruque;Tony Sawford

  • A potential role for integrins in host cell entry by SARS-CoV-2

    Unknown

  • The Gene Ontology: Enhancements for 2011

    J. A. Blake;M. Dolan;H. Drabkin;D. P. Hill

  • Capturing variation impact on molecular interactions in the IMEx Consortium mutations data set

    N Del-Toro;M Duesbury;M Koch;M Koch

  • The fission yeast SPB component Cut12 links bipolar spindle formation to mitotic control

    Alan J. Bridge;Mary Morphew;Rachel Bartlett;Iain M. Hagan

Frequent Co-Authors

Ioannis Xenarios
Ioannis Xenarios University of Lausanne
Nicole Redaschi
Nicole Redaschi Swiss Institute of Bioinformatics
Lydie Bougueleret
Lydie Bougueleret Swiss Institute of Bioinformatics
Sandra Orchard
Sandra Orchard European Bioinformatics Institute
Patrick Masson
Patrick Masson Kazan Federal University
Elisabeth Gasteiger
Elisabeth Gasteiger Swiss Institute of Bioinformatics
Maria Jesus Martin
Maria Jesus Martin European Bioinformatics Institute
Rolf Apweiler
Rolf Apweiler European Bioinformatics Institute
Claire O'Donovan
Claire O'Donovan European Bioinformatics Institute
Paul D. Thomas
Paul D. Thomas University of Southern California

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