Chanson J. Brumme

Overview

Best Publications

• The major genetic determinants of HIV-1 control affect HLA class I peptide presentation

  Pereyra F;Jia X;McLaren Pj

  1679
  Citations

• Predictors of HIV Drug-Resistance Mutations in a Large Antiretroviral-Naive Cohort Initiating Triple Antiretroviral Therapy

  P. Richard Harrigan;Robert S. Hogg;Winnie W. Y. Dong;Benita Yip

  575
  Citations

• Adaptation of HIV-1 to human leukocyte antigen class I

  Y. Kawashima;K. Pfafferott;J. Frater;P. Matthews

  565
  Citations

• Influence of HLA-C Expression Level on HIV Control

  Richard Apps;Richard Apps;Ying Qi;Ying Qi;Jonathan M. Carlson;Haoyan Chen;Haoyan Chen

  407
  Citations

• Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection

  Matthew R. Henn;Christian L. Boutwell;Patrick Charlebois;Niall J Lennon

  401
  Citations

• Molecular and Clinical Epidemiology of CXCR4-Using HIV-1 in a Large Population of Antiretroviral-Naive Individuals

  Zabrina L. Brumme;Zabrina L. Brumme;James Goodrich;Howard B. Mayer;Chanson J. Brumme

  362
  Citations

• Antigen Load and Viral Sequence Diversification Determine the Functional Profile of HIV-1–Specific CD8+ T Cells

  Hendrik Streeck;Zabrina L Brumme;Michael P. Anastario;Kristin W Cohen

  308
  Citations

• HLA-B57/B*5801 Human Immunodeficiency Virus Type 1 Elite Controllers Select for Rare Gag Variants Associated with Reduced Viral Replication Capacity and Strong Cytotoxic T-Lymphocyte Recognition.

  Toshiyuki Miura;Mark A. Brockman;Arne Schneidewind;Michael Lobritz

  294
  Citations

• Human Immunodeficiency Virus Type 1-Specific CD8+ T-Cell Responses during Primary Infection Are Major Determinants of the Viral Set Point and Loss of CD4+ T Cells

  Hendrik Streeck;Jonathan S. Jolin;Ying Qi;Bader Yassine-Diab

  261
  Citations

• Automating HIV Drug Resistance Genotyping with RECall, a Freely Accessible Sequence Analysis Tool

  Conan K. Woods;Chanson J. Brumme;Tommy F. Liu;Celia K. S. Chui

  225
  Citations

• Evidence of Differential HLA Class I-Mediated Viral Evolution in Functional and Accessory/Regulatory Genes of HIV-1

  Zabrina L Brumme;Zabrina L Brumme;Zabrina L Brumme;Chanson J Brumme;Chanson J Brumme;David Heckerman;Bette T Korber;Bette T Korber

  218
  Citations

• Marked Epitope- and Allele-Specific Differences in Rates of Mutation in Human Immunodeficiency Type 1 (HIV-1) Gag, Pol, and Nef Cytotoxic T-Lymphocyte Epitopes in Acute/Early HIV-1 Infection

  Zabrina L. Brumme;Chanson J. Brumme;Jonathan Carlson;Jonathan Carlson;Hendrik Streeck

  204
  Citations

• HLA-associated immune escape pathways in HIV-1 subtype B Gag, Pol and Nef proteins

  Zabrina L. Brumme;Zabrina L. Brumme;Mina John;Jonathan M. Carlson;Chanson J. Brumme

  200
  Citations

• A genome-to-genome analysis of associations between human genetic variation, HIV-1 sequence diversity, and viral control

  István Bartha;Jonathan M Carlson;Chanson J Brumme;Paul J McLaren;Paul J McLaren;Paul J McLaren

  198
  Citations

• Definition of the viral targets of protective HIV-1-specific T cell responses.

  Beatriz Mothe;Anuska Llano;F. Javier Ibarrondo;Marcus Daniels

  191
  Citations

• Reduced Magnitude and Durability of Humoral Immune Responses to COVID-19 mRNA Vaccines Among Older Adults

  Unknown

  173
  Citations

• Phylogenetic dependency networks: inferring patterns of CTL escape and codon covariation in HIV-1 Gag.

  Jonathan M. Carlson;Jonathan M. Carlson;Zabrina L. Brumme;Christine M. Rousseau;Chanson J. Brumme

  167
  Citations

• Early Selection in Gag by Protective HLA Alleles Contributes to Reduced HIV-1 Replication Capacity That May Be Largely Compensated for in Chronic Infection

  Mark A. Brockman;Mark A. Brockman;Mark A. Brockman;Zabrina L. Brumme;Zabrina L. Brumme;Zabrina L. Brumme;Chanson J. Brumme;Chanson J. Brumme;Toshiyuki Miura;Toshiyuki Miura

  161
  Citations

• HLA-Associated Alterations in Replication Capacity of Chimeric NL4-3 Viruses Carrying gag-protease from Elite Controllers of Human Immunodeficiency Virus Type 1

  Toshiyuki Miura;Mark A. Brockman;Zabrina L. Brumme;Chanson J. Brumme

  159
  Citations

• Genetic Characterization of Human Immunodeficiency Virus Type 1 in Elite Controllers: Lack of Gross Genetic Defects or Common Amino Acid Changes

  Toshiyuki Miura;Mark A. Brockman;Chanson J. Brumme;Zabrina L. Brumme

  158
  Citations

• Impaired Replication Capacity of Acute/Early Viruses in Persons Who Become HIV Controllers

  Toshiyuki Miura;Zabrina L. Brumme;Mark A. Brockman;Pamela Rosato

  153
  Citations