D-Index & Metrics Best Publications

D-Index & Metrics D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines.

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Biology and Biochemistry D-index 50 Citations 10,908 120 World Ranking 13000 National Ranking 5524

Overview

What is he best known for?

The fields of study he is best known for:

  • Gene
  • DNA
  • Genetics

His primary areas of investigation include Genetics, DNA methylation, Methylation, Computational biology and Genome. His Genetics and Gene, Epigenetics, Regulation of gene expression, Gene expression profiling and PAR-CLIP investigations all form part of his Genetics research activities. His study in Bisulfite sequencing and Epigenomics are all subfields of DNA methylation.

In his research, Illumina Methylation Assay, Retrotransposon, Germ cell, Reprogramming and Somatic cell is intimately related to RNA-Directed DNA Methylation, which falls under the overarching field of Methylation. Andrew D. Smith combines subjects such as RNA-Protein Interaction and Identification with his study of Computational biology. His biological study spans a wide range of topics, including Data mining and Task.

His most cited work include:

  • Analysis of the Vertebrate Insulator Protein CTCF-Binding Sites in the Human Genome (885 citations)
  • Using quality scores and longer reads improves accuracy of Solexa read mapping (323 citations)
  • An integrative genomics approach identifies Hypoxia Inducible Factor-1 (HIF-1)-target genes that form the core response to hypoxia (319 citations)

What are the main themes of his work throughout his whole career to date?

His primary areas of study are Genetics, Computational biology, DNA methylation, Gene and Genome. His Computational biology research incorporates elements of Sequence analysis, Bioinformatics, RNA, RNA-binding protein and Human genetics. His DNA methylation research is multidisciplinary, incorporating perspectives in Methylation and Epigenetics.

His work on Transcription factor, Transcriptome, DNA binding site and Ribosome profiling as part of his general Gene study is frequently connected to Conserved sequence, thereby bridging the divide between different branches of science. His Genome study integrates concerns from other disciplines, such as Task, DNA hypomethylation and DNA sequencing. His study looks at the relationship between RNA-Directed DNA Methylation and fields such as Illumina Methylation Assay, as well as how they intersect with chemical problems.

He most often published in these fields:

  • Genetics (37.90%)
  • Computational biology (31.45%)
  • DNA methylation (29.03%)

What were the highlights of his more recent work (between 2018-2021)?

  • Computational biology (31.45%)
  • Cancer research (9.68%)
  • Gene (20.16%)

In recent papers he was focusing on the following fields of study:

Andrew D. Smith mainly focuses on Computational biology, Cancer research, Gene, Transcription and DNA methylation. His Computational biology study incorporates themes from Genome, Kidney, Human genetics and Profiling. His research on Gene concerns the broader Genetics.

His Transcription research integrates issues from Promoter, RNA splicing and Retrotransposon, Transposable element. The DNA methylation study combines topics in areas such as Prokaryote, Methylation, DNA and Epigenetics. His work in Methylation tackles topics such as Regulation of gene expression which are related to areas like Cellular differentiation.

Between 2018 and 2021, his most popular works were:

  • Improvements to the ARTIC multiplex PCR method for SARS-CoV-2 genome sequencing using nanopore (44 citations)
  • Circulating Tumor Cells Exhibit Metastatic Tropism and Reveal Brain Metastasis Drivers (31 citations)
  • In Vivo Developmental Trajectories of Human Podocyte Inform In Vitro Differentiation of Pluripotent Stem Cell-Derived Podocytes (15 citations)

In his most recent research, the most cited papers focused on:

  • Gene
  • DNA
  • Genetics

Andrew D. Smith focuses on Computational biology, Messenger RNA, RNA, Cellular differentiation and Cancer research. Andrew D. Smith interconnects Library preparation and Genome in the investigation of issues within Computational biology. The concepts of his RNA study are interwoven with issues in Transcription factor, FOXM1 and Transcription.

His studies in Cellular differentiation integrate themes in fields like Renal corpuscle, Transplantation and Cell biology. His RNA splicing study is concerned with Gene in general. His is involved in several facets of Gene study, as is seen by his studies on Epigenetics, Regulation of gene expression, Chromatin, Enhancer and DNA methylation.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

Analysis of the Vertebrate Insulator Protein CTCF-Binding Sites in the Human Genome

Tae Hoon Kim;Ziedulla K. Abdullaev;Andrew D. Smith;Keith A. Ching.
Cell (2007)

1185 Citations

An integrative genomics approach identifies Hypoxia Inducible Factor-1 (HIF-1)-target genes that form the core response to hypoxia

Yair Benita;Hirotoshi Kikuchi;Andrew D. M. Smith;Michael Q. Zhang.
Nucleic Acids Research (2009)

506 Citations

Using quality scores and longer reads improves accuracy of Solexa read mapping

Andrew D. M. Smith;Zhenyu Xuan;Michael Q. Zhang.
BMC Bioinformatics (2008)

429 Citations

Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates

Antoine Molaro;Emily Hodges;Fang Fang;Qiang Song.
Cell (2011)

335 Citations

Directional DNA Methylation Changes and Complex Intermediate States Accompany Lineage Specificity in the Adult Hematopoietic Compartment

Emily Hodges;Emily Hodges;Antoine Molaro;Antoine Molaro;Camila O. Dos Santos;Camila O. Dos Santos;Pramod Thekkat;Pramod Thekkat.
Molecular Cell (2011)

284 Citations

A model of breast cancer heterogeneity reveals vascular mimicry as a driver of metastasis

Elvin Wagenblast;Mar Soto;Sara Gutiérrez-Ángel;Christina A. Hartl.
Nature (2015)

265 Citations

The maize methylome influences mRNA splice sites and reveals widespread paramutation-like switches guided by small RNA.

Michael Regulski;Zhenyuan Lu;Jude Kendall;Mark T.A. Donoghue.
Genome Research (2013)

261 Citations

High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing

Emily Hodges;Andrew D. Smith;Andrew D. Smith;Jude Kendall;Zhenyu Xuan.
Genome Research (2009)

258 Citations

A Reference Methylome Database and Analysis Pipeline to Facilitate Integrative and Comparative Epigenomics

Qiang Song;Benjamin Decato;Elizabeth E. Hong;Meng Zhou.
PLOS ONE (2013)

242 Citations

Site identification in high-throughput RNA–protein interaction data

Philip J. Uren;Emad Bahrami-Samani;Suzanne C. Burns;Mei Qiao.
Bioinformatics (2012)

209 Citations

If you think any of the details on this page are incorrect, let us know.

Contact us

Best Scientists Citing Andrew D. Smith

Michael Q. Zhang

Michael Q. Zhang

Tsinghua University

Publications: 54

Bing Ren

Bing Ren

University of California, San Diego

Publications: 37

Wolf Reik

Wolf Reik

Babraham Institute

Publications: 34

Nathan M. Springer

Nathan M. Springer

University of Minnesota

Publications: 29

Dirk Schübeler

Dirk Schübeler

Friedrich Miescher Institute

Publications: 29

Manel Esteller

Manel Esteller

Institució Catalana de Recerca i Estudis Avançats

Publications: 26

Uwe Ohler

Uwe Ohler

Max Delbrück Center for Molecular Medicine

Publications: 26

Doreen Ware

Doreen Ware

Cold Spring Harbor Laboratory

Publications: 25

Susan J. Clark

Susan J. Clark

Garvan Institute of Medical Research

Publications: 23

Robert J. Schmitz

Robert J. Schmitz

University of Georgia

Publications: 22

Gregory J. Hannon

Gregory J. Hannon

University of Cambridge

Publications: 22

Melissa H. Little

Melissa H. Little

University of Melbourne

Publications: 20

Tomas Marques-Bonet

Tomas Marques-Bonet

Pompeu Fabra University

Publications: 19

Mark J. Pallen

Mark J. Pallen

University of East Anglia

Publications: 19

Alexander Meissner

Alexander Meissner

Max Planck Institute for Molecular Genetics

Publications: 19

Qing Li

Qing Li

Chinese Academy of Sciences

Publications: 19

Trending Scientists

Leonel Sousa

Leonel Sousa

Instituto Superior Técnico

P. G. L. Leach

P. G. L. Leach

University of KwaZulu-Natal

Gerhard H. Jirka

Gerhard H. Jirka

Karlsruhe Institute of Technology

Yonghao Zhang

Yonghao Zhang

University of Edinburgh

Hassan Karimi-Maleh

Hassan Karimi-Maleh

University of Electronic Science and Technology of China

Richard L. Jaffe

Richard L. Jaffe

Ames Research Center

Jane M. Reid

Jane M. Reid

University of Aberdeen

Masafumi Matsui

Masafumi Matsui

Kyoto University

Ken W.Y. Cho

Ken W.Y. Cho

University of California, Irvine

Reinhart Heinrich

Reinhart Heinrich

Humboldt-Universität zu Berlin

Pramod K. Pandey

Pramod K. Pandey

University of California, Davis

Brian Leber

Brian Leber

McMaster University

John G. Tew

John G. Tew

Virginia Commonwealth University

Jeffrey G. Johnson

Jeffrey G. Johnson

Columbia University

Theodora Duka

Theodora Duka

University of Sussex

Donald W. Marion

Donald W. Marion

University of Pittsburgh

Something went wrong. Please try again later.