D-Index & Metrics Best Publications

D-Index & Metrics D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines.

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Genetics D-index 62 Citations 9,094 133 World Ranking 2202 National Ranking 4

Overview

What is he best known for?

The fields of study he is best known for:

  • Gene
  • DNA
  • Genome

Jiří Macas mostly deals with Genetics, Genome, Repeated sequence, DNA sequencing and Genome size. His study in Centromere, Satellite DNA, Eukaryotic chromosome structure, Yeast artificial chromosome and Ploidy are all subfields of Genetics. In his study, Solanum is strongly linked to Satellite, which falls under the umbrella field of Satellite DNA.

His Genome study integrates concerns from other disciplines, such as Pyrosequencing and Computational biology. His Pyrosequencing research incorporates themes from Sativum, Sequence analysis, Massive parallel sequencing and Transposable element. As part of one scientific family, he deals mainly with the area of Repeated sequence, narrowing it down to issues related to the Tandem repeat, and often Genomic organization.

His most cited work include:

  • RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads. (371 citations)
  • Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data (299 citations)
  • Repetitive DNA in the pea ( Pisum sativum L.) genome: comprehensive characterization using 454 sequencing and comparison to soybean and Medicago truncatula (234 citations)

What are the main themes of his work throughout his whole career to date?

His main research concerns Genetics, Genome, Chromosome, Satellite DNA and Genome size. His Genetics research focuses on Retrotransposon, DNA sequencing, Repeated sequence, Centromere and DNA. His Genome research incorporates elements of Evolutionary biology, Pyrosequencing, Phylogenetics and Computational biology.

The study incorporates disciplines such as Molecular biology and Mitosis in addition to Chromosome. He has researched Satellite DNA in several fields, including Sequence analysis and Satellite. Genome project and Whole genome sequencing is closely connected to Genome evolution in his research, which is encompassed under the umbrella topic of Genome size.

He most often published in these fields:

  • Genetics (73.03%)
  • Genome (55.06%)
  • Chromosome (26.97%)

What were the highlights of his more recent work (between 2017-2021)?

  • Genome (55.06%)
  • Evolutionary biology (17.98%)
  • Genome size (21.35%)

In recent papers he was focusing on the following fields of study:

Jiří Macas spends much of his time researching Genome, Evolutionary biology, Genome size, Satellite DNA and Centromere. As a part of the same scientific study, Jiří Macas usually deals with the Evolutionary biology, concentrating on Phylogenetic tree and frequently concerns with Phylogenetics. His Satellite DNA study combines topics in areas such as Heterochromatin, Sequence analysis and Sequence.

His study in Tandem repeat is interdisciplinary in nature, drawing from both Computational biology and Repeated sequence. His Gene study is associated with Genetics. His work blends Genetics and Russian wheat aphid studies together.

Between 2017 and 2021, his most popular works were:

  • A reference genome for pea provides insight into legume genome evolution (86 citations)
  • Systematic survey of plant LTR-retrotransposons elucidates phylogenetic relationships of their polyprotein domains and provides a reference for element classification (63 citations)
  • Satellite DNA in Vicia faba is characterized by remarkable diversity in its sequence composition, association with centromeres, and replication timing. (36 citations)

In his most recent research, the most cited papers focused on:

  • Gene
  • DNA
  • Genome

His primary areas of investigation include Evolutionary biology, Genome, Centromere, Retrotransposon and Satellite DNA. The Evolutionary biology study combines topics in areas such as Viridiplantae and Whole genome sequencing. His Genome research is multidisciplinary, relying on both Chromatin, Consensus sequence and Vicia faba.

His Centromere research includes themes of Metaphase, Mitosis and Kinetochore. The Retrotransposon study which covers Phylogenetic tree that intersects with Phylogenetics and Primer binding site. His Satellite DNA research is multidisciplinary, incorporating perspectives in Heterochromatin, Nanopore sequencing, Sequence analysis and Tandem repeat.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads.

Petr Novák;Pavel Neumann;Jiří Pech;Jaroslav Steinhaisl.
Bioinformatics (2013)

571 Citations

Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data.

Petr Novák;Pavel Neumann;Jiří Macas.
BMC Bioinformatics (2010)

424 Citations

Repetitive DNA in the pea ( Pisum sativum L.) genome: comprehensive characterization using 454 sequencing and comparison to soybean and Medicago truncatula

Jiří Macas;Pavel Neumann;Alice Navrátilová.
BMC Genomics (2007)

301 Citations

Pea (Pisum sativum L.) in the Genomic Era

Petr Smýkal;Gregoire Aubert;Judith Burstin;Clarice J. Coyne.
Agronomy (2012)

238 Citations

A reference genome for pea provides insight into legume genome evolution

Jonathan Kreplak;Mohammed Amin Madoui;Petr Cápal;Petr Novák.
Nature Genetics (2019)

227 Citations

Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences

Mihaela Maria Martis;Sonja Klemme;Ali Mohammad Banaei-Moghaddam;Frank R. Blattner.
Proceedings of the National Academy of Sciences of the United States of America (2012)

200 Citations

Repeatless and Repeat-Based Centromeres in Potato: Implications for Centromere Evolution

Zhiyun Gong;Zhiyun Gong;Yufeng Wu;Andrea Koblížková;Giovana A. Torres;Giovana A. Torres.
The Plant Cell (2012)

199 Citations

Plant centromeric retrotransposons: a structural and cytogenetic perspective

Pavel Neumann;Alice Navrátilová;Andrea Koblížková;Eduard Kejnovský.
Mobile Dna (2011)

183 Citations

Systematic survey of plant LTR-retrotransposons elucidates phylogenetic relationships of their polyprotein domains and provides a reference for element classification

Pavel Neumann;Petr Novák;Nina Hoštáková;Jiří Macas.
Mobile Dna (2019)

168 Citations

TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads

Petr Novák;Laura Ávila Robledillo;Andrea Koblížková;Iva Vrbová.
Nucleic Acids Research (2017)

163 Citations

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