D-Index & Metrics Best Publications
Microbiology
UK
2023

D-Index & Metrics D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines.

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Microbiology D-index 73 Citations 18,974 198 World Ranking 1016 National Ranking 89

Research.com Recognitions

Awards & Achievements

2023 - Research.com Microbiology in United Kingdom Leader Award

Overview

What is he best known for?

The fields of study he is best known for:

  • Gene
  • Bacteria
  • DNA

His primary areas of investigation include Microbiology, Salmonella typhi, Typhoid fever, Genetics and Salmonella. His Microbiology research focuses on Internal medicine and how it relates to Coinfection. His Salmonella typhi research is multidisciplinary, relying on both Veterinary medicine, Interquartile range and Incidence.

The Typhoid fever study combines topics in areas such as Antibacterial agent, Gastroenterology, Immunology, Chloramphenicol and Ofloxacin. The various areas that he examines in his Salmonella study include Genetic variation, Molecular evolution, Phylogenetic tree and Virulence. His Salmonella enterica study which covers Phylogenetics that intersects with Subspecies.

His most cited work include:

  • Performance comparison of benchtop high-throughput sequencing platforms (1067 citations)
  • Performance comparison of benchtop high-throughput sequencing platforms (1067 citations)
  • Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18 (1059 citations)

What are the main themes of his work throughout his whole career to date?

John Wain spends much of his time researching Microbiology, Salmonella typhi, Typhoid fever, Genetics and Salmonella. His study of Serotype is a part of Microbiology. His work investigates the relationship between Serotype and topics such as Salmonella enterica that intersect with problems in Enterobacteriaceae.

His Salmonella typhi research is multidisciplinary, incorporating elements of Chloramphenicol, Antibiotic resistance and Drug resistance. His Typhoid fever research includes elements of Ofloxacin, Internal medicine, Antibacterial agent and Immunology. His work deals with themes such as Veterinary medicine and Genomic island, which intersect with Salmonella.

He most often published in these fields:

  • Microbiology (58.70%)
  • Salmonella typhi (43.72%)
  • Typhoid fever (46.96%)

What were the highlights of his more recent work (between 2015-2021)?

  • Whole genome sequencing (12.15%)
  • Microbiology (58.70%)
  • Genetics (30.77%)

In recent papers he was focusing on the following fields of study:

His primary scientific interests are in Whole genome sequencing, Microbiology, Genetics, Genome and Gene. His research in Whole genome sequencing intersects with topics in Salmonella typhi, Salmonella enterica, Outbreak, Genomics and Computational biology. His Salmonella typhi study incorporates themes from Mutation, Wild type and Virology.

His studies in Microbiology integrate themes in fields like Genotype and Escherichia coli. His work carried out in the field of Genetics brings together such families of science as Gut flora and Serotype. His research investigates the link between Genome and topics such as DNA sequencing that cross with problems in Multiplex.

Between 2015 and 2021, his most popular works were:

  • Identification of bacterial pathogens and antimicrobial resistance directly from clinical urines by nanopore-based metagenomic sequencing (171 citations)
  • Nanopore metagenomics enables rapid clinical diagnosis of bacterial lower respiratory infection. (99 citations)
  • Nanopore metagenomics enables rapid clinical diagnosis of bacterial lower respiratory infection. (99 citations)

In his most recent research, the most cited papers focused on:

  • Gene
  • Bacteria
  • DNA

His primary areas of study are Nanopore sequencing, Genetics, Metagenomics, Nanopore and Microbiology. His Genetics study frequently intersects with other fields, such as Gut flora. His Microbiology research incorporates themes from Multilocus sequence typing and Escherichia coli.

His biological study spans a wide range of topics, including Genomic island and Salmonella. His work on Salmonella enterica is typically connected to Context as part of general Salmonella study, connecting several disciplines of science. His Plasmid research includes themes of Salmonella typhi and Typhoid fever.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

Performance comparison of benchtop high-throughput sequencing platforms

Nicholas J Loman;Raju V Misra;Timothy J Dallman;Chrystala Constantinidou.
Nature Biotechnology (2012)

1595 Citations

Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18

J. Parkhill;G. Dougan;K. D. James;N. R. Thomson.
Nature (2001)

1431 Citations

A study of typhoid fever in five asian countries: disease burden and implications for controls

R Leon Ochiai;Camilo J Acosta;M Carolina Danovaro-Holliday;Dong Baiqing.
Bulletin of The World Health Organization (2008)

743 Citations

Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica

Mark Achtman;John Wain;John Wain;François Xavier Weill;Satheesh Nair;Satheesh Nair.
PLOS Pathogens (2012)

618 Citations

Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants

Gemma C. Langridge;Minh Duy Phan;Daniel J. Turner;Timothy T. Perkins.
Genome Research (2009)

594 Citations

High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi

Kathryn E. Holt;Julian Parkhill;Camila J. Mazzoni;Philippe Roumagnac.
Nature Genetics (2008)

540 Citations

MinION nanopore sequencing identifies the position and structure of a bacterial antibiotic resistance island.

Philip M Ashton;Satheesh Nair;Tim J Dallman;Salvatore Rubino.
Nature Biotechnology (2015)

429 Citations

Salmonella typhi, the causative agent of typhoid fever, is approximately 50,000 years old.

Claire Kidgell;Ulrike Reichard;John Wain;Bodo Linz.
Infection, Genetics and Evolution (2002)

422 Citations

Quinolone-resistant Salmonella typhi in Viet Nam: molecular basis of resistance and clinical response to treatment

John Wain;Nguyen T. T. Hoa;Nguyen T. Chinh;Ha Vinh.
Clinical Infectious Diseases (1997)

413 Citations

Intracontinental spread of human invasive Salmonella Typhimurium pathovariants in sub-Saharan Africa

Chinyere K. Okoro;Robert A. Kingsley;Thomas Richard Connor;Simon R. Harris.
Nature Genetics (2012)

400 Citations

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