Jacky L. Snoep

Overview

Best Publications

• The Systems Biology Graphical Notation

  Nicolas Le Novere;Michael Hucka;Huaiyu Mi;Stuart Moodie

  1086
  Citations

• BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems

  Nicolas Le Novère;Benjamin J. Bornstein;Alexander Broicher;Mélanie Courtot

  1002
  Citations

• Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochemistry.

  Bas Teusink;Jutta Passarge;Corinne A. Reijenga;Eugenia Esgalhado

  903
  Citations

• Minimum information requested in the annotation of biochemical models (MIRIAM)

  Nicolas Le Novère;Andrew Finney;Michael Hucka;Upinder S. Bhalla

  736
  Citations

• Biomodels database: an enhanced curated and annotated resource for published quantitative kinetic models

  Chen Li;Marco Donizelli;Nicolas Rodriguez;Harish Dharuri

  664
  Citations

• The Steady-State Internal Redox State (NADH/NAD) Reflects the External Redox State and Is Correlated with Catabolic Adaptation in Escherichia coli

  M.R. de Graef;S.V. Alexeeva;J.L. Snoep;M.J. Teixeira De Mattos

  417
  Citations

• Web-based kinetic modelling using JWS Online

  Brett G. Olivier;Jacky L. Snoep

  405
  Citations

• The glycolytic flux in Escherichia coli is controlled by the demand for ATP.

  Brian J. Koebmann;Hans V. Westerhoff;Jacky L. Snoep;Dan Nilsson

  399
  Citations

• Metabolic engineering of lactic acid bacteria, the combined approach: kinetic modelling, metabolic control and experimental analysis

  Marcel H. N. Hoefnagel;Marjo J. C. Starrenburg;Dirk E. Martens;Jeroen Hugenholtz

  296
  Citations

• Reproducible computational biology experiments with SED-ML--the Simulation Experiment Description Markup Language.

  Dagmar Waltemath;Richard R. Adams;Frank T. Bergmann;Michael Hucka

  294
  Citations

• Minimum Information About a Simulation Experiment (MIASE)

  Dagmar Waltemath;Richard R. Adams;Daniel A. Beard;Frank T. Bergmann;Frank T. Bergmann

  185
  Citations

• Isolation, characterization, and physiological role of the pyruvate dehydrogenase complex and alpha-acetolactate synthase of Lactococcus lactis subsp. lactis bv. diacetylactis.

  J. L. Snoep;M. J. Teixeira De Mattos;M. J. C. Starrenburg;J. Hugenholtz

  183
  Citations

• Construction and Characterization of an Effector Strain of Streptococcus mutans for Replacement Therapy of Dental Caries

  J. D. Hillman;T. A. Brooks;S. M. Michalek;C. C. Harmon

  176
  Citations

• Towards building the silicon cell: a modular approach.

  Jacky L. Snoep;Frank Bruggeman;Brett G. Olivier;Hans V. Westerhoff;Hans V. Westerhoff

  176
  Citations

• Transduction of Intracellular and Intercellular Dynamics in Yeast Glycolytic Oscillations

  Jana Wolf;Jutta Passarge;Oscar J.G. Somsen;Jacky L. Snoep

  160
  Citations

• Protein burden in Zymomonas mobilis: negative flux and growth control due to overproduction of glycolytic enzymes

  Jacky L. Snoep;Lorraine P. Yomano;Hans V. Westerhoff;Lonnie O. Ingram

  153
  Citations

• DNA supercoiling in Escherichia coli is under tight and subtle homeostatic control, involving gene-expression and metabolic regulation of both topoisomerase I and DNA gyrase.

  Jacky L. Snoep;Jacky L. Snoep;Coen C. van der Weijden;Heidi W. Andersen;Heidi W. Andersen;Hans V. Westerhoff;Hans V. Westerhoff

  150
  Citations

• Role of hexose transport in control of glycolytic flux in Saccharomyces cerevisiae.

  Karin Elbing;Christer Larsson;Roslyn M. Bill;Eva Albers

  146
  Citations

• Characterization of the Zymomonas mobilis glucose facilitator gene product (glf) in recombinant Escherichia coli: examination of transport mechanism, kinetics and the role of glucokinase in glucose transport

  Corrine Parker;Wendy O. Barnell;Jacky L. Snoep;Lonnie O. Ingram

  145
  Citations

• Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes

  Teusink B;Passarge J;Reijenga Ka;Esgalhado E

  11
  Citations