Michael Hucka spends much of his time researching SBML, BioModels Database, Systems biology, Resource and Systems Biology Ontology. The various areas that Michael Hucka examines in his SBML study include CellML and Programming language. He mostly deals with Systems Biology Graphical Notation in his studies of Programming language.
He combines subjects such as Data mining, Software, Software suite, Toolbox and Data science with his study of Systems biology. The study incorporates disciplines such as Annotation, Controlled vocabulary, Information retrieval, Computational biology and Scope in addition to Resource. While the research belongs to areas of Systems Biology Ontology, he spends his time largely on the problem of Modelling biological systems, intersecting his research to questions surrounding Physiome.
SBML, Software, Programming language, Systems biology and Markup language are his primary areas of study. His SBML research is multidisciplinary, relying on both Theoretical computer science and Computational model. The Software development research Michael Hucka does as part of his general Software study is frequently linked to other disciplines of science, such as Reuse, therefore creating a link between diverse domains of science.
His Systems biology study which covers Data science that intersects with Variety. Michael Hucka has included themes like Software system and File format in his Markup language study. His work deals with themes such as CellML, Resource and Information retrieval, which intersect with BioModels Database.
His primary scientific interests are in SBML, Programming language, Systems biology, Interoperability and Data science. SBML is closely attributed to CellML in his work. In general Programming language, his work in Software package and Correctness is often linked to Test suite, Conformance testing and Nostril linking many areas of study.
The concepts of his Systems biology study are interwoven with issues in Software, Java annotation, Software engineering and Synthetic biology. His Interoperability study incorporates themes from Set, Protocol, Computational model and Visualization. His Data science study integrates concerns from other disciplines, such as Variety, Field and Source code.
His primary areas of study are Interoperability, Computational model, SBML, Software and Protocol. His work in Computational model addresses subjects such as Annotation, which are connected to disciplines such as Information retrieval, Controlled vocabulary, Python and CellML. SBML is a subfield of Markup language that he investigates.
His study in Markup language is interdisciplinary in nature, drawing from both Programming language and Software system. His study in Systems biology extends to Software with its themes. As a member of one scientific family, Michael Hucka mostly works in the field of Protocol, focusing on Cobra and, on occasion, Visualization, Graph drawing and Systems engineering.
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The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models.
M. Hucka;A. Finney;H. M. Sauro;H. Bolouri;H. Bolouri.
Bioinformatics (2003)
A community-driven global reconstruction of human metabolism
Ines Thiele;Neil Swainston;Ronan M T Fleming;Andreas Hoppe.
Nature Biotechnology (2013)
The Systems Biology Graphical Notation
Nicolas Le Novere;Michael Hucka;Huaiyu Mi;Stuart Moodie.
Nature Biotechnology (2009)
BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems
Nicolas Le Novère;Benjamin J. Bornstein;Alexander Broicher;Mélanie Courtot.
Nucleic Acids Research (2006)
The BioPAX community standard for pathway data sharing
Emek Demir;Emek Demir;Michael P. Cary;Suzanne Paley;Ken Fukuda.
Nature Biotechnology (2010)
A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology
Markus Herrgard;Neil Swainston;Paul Dobson;Warwick B. Dunn.
Nature Biotechnology (2008)
Minimum information requested in the annotation of biochemical models (MIRIAM)
Nicolas Le Novère;Andrew Finney;Michael Hucka;Upinder S. Bhalla.
Nature Biotechnology (2005)
Biomodels database: an enhanced curated and annotated resource for published quantitative kinetic models
Chen Li;Marco Donizelli;Nicolas Rodriguez;Harish Dharuri.
BMC Systems Biology (2010)
Rules for Modeling Signal-Transduction Systems
William S. Hlavacek;James R. Faeder;Michael L. Blinov;Richard G. Posner.
Science Signaling (2006)
LibSBML: an API library for SBML.
Benjamin J. Bornstein;Sarah M. Keating;Akiya Jouraku;Michael Hucka.
Bioinformatics (2008)
Babraham Institute
University of Konstanz
University of Washington
University of Colorado Boulder
Vrije Universiteit Amsterdam
University of Connecticut
Okinawa Institute of Science and Technology
California Institute of Technology
University of Toronto
University of California, San Diego
Profile was last updated on December 6th, 2021.
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