D-Index & Metrics Best Publications
Kazuyuki Shimizu

Kazuyuki Shimizu

D-Index & Metrics D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines.

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Biology and Biochemistry D-index 56 Citations 8,975 183 World Ranking 10110 National Ranking 749

Overview

What is he best known for?

The fields of study he is best known for:

  • Enzyme
  • Metabolism
  • Gene

Kazuyuki Shimizu mainly investigates Biochemistry, Pentose phosphate pathway, Metabolic flux analysis, Citric acid cycle and Metabolism. His works in Glyoxylate cycle, Escherichia coli, Mutant, Glycolysis and Flux are all subjects of inquiry into Biochemistry. His Escherichia coli research incorporates themes from Gene expression and Enzyme.

His Mutant study incorporates themes from Gene knockout and Dehydrogenase. The various areas that Kazuyuki Shimizu examines in his Pentose phosphate pathway study include Molecular biology, Malic enzyme and Catabolite repression. His Metabolism research incorporates elements of Glucose-6-phosphate isomerase and Lactic acid.

His most cited work include:

  • Multiple high-throughput analyses monitor the response of E. coli to perturbations. (570 citations)
  • Multiple high-throughput analyses monitor the response of E. coli to perturbations. (570 citations)
  • Energetics and carbon metabolism during growth of microalgal cells under photoautotrophic, mixotrophic and cyclic light-autotrophic/dark-heterotrophic conditions. (278 citations)

What are the main themes of his work throughout his whole career to date?

His primary areas of study are Biochemistry, Escherichia coli, Metabolism, Citric acid cycle and Mutant. His study in Pentose phosphate pathway, Fermentation, Gene knockout, Glyoxylate cycle and Enzyme falls within the category of Biochemistry. His research integrates issues of Oxidative phosphorylation, Glucose-6-phosphate isomerase, Molecular biology, Overflow metabolism and Malic enzyme in his study of Pentose phosphate pathway.

His biological study spans a wide range of topics, including Gene expression, Metabolic regulation, Metabolic pathway and Microbiology. His Metabolism research is multidisciplinary, incorporating perspectives in Transcriptional regulation, Metabolic engineering and Cell biology. Kazuyuki Shimizu has researched Citric acid cycle in several fields, including Glycolysis, Flux, Isocitrate dehydrogenase and Dehydrogenase.

He most often published in these fields:

  • Biochemistry (108.66%)
  • Escherichia coli (56.69%)
  • Metabolism (41.34%)

What were the highlights of his more recent work (between 2011-2020)?

  • Biochemistry (108.66%)
  • Escherichia coli (56.69%)
  • Catabolite repression (15.75%)

In recent papers he was focusing on the following fields of study:

His primary areas of investigation include Biochemistry, Escherichia coli, Catabolite repression, Fermentation and Metabolic engineering. His study in Citric acid cycle, Metabolism, Metabolite, Flux and Pentose phosphate pathway is done as part of Biochemistry. His study in Pentose phosphate pathway is interdisciplinary in nature, drawing from both Overflow metabolism and Oxidative phosphorylation.

His Escherichia coli research is multidisciplinary, incorporating elements of Gene knockout, Metabolic flux analysis, Mutant and Enzyme. He works mostly in the field of Catabolite repression, limiting it down to topics relating to PEP group translocation and, in certain cases, Transcriptional regulation, as a part of the same area of interest. His studies deal with areas such as Metabolic pathway, Biofuel, Metabolic regulation and Systems biology as well as Metabolic engineering.

Between 2011 and 2020, his most popular works were:

  • Regulation Systems of Bacteria such as Escherichia coli in Response to Nutrient Limitation and Environmental Stresses (125 citations)
  • Simultaneous production of 3-hydroxypropionic acid and 1,3-propanediol from glycerol by a recombinant strain of Klebsiella pneumoniae. (91 citations)
  • Metabolic Regulation of a Bacterial Cell System with Emphasis on Escherichia coli Metabolism (69 citations)

In his most recent research, the most cited papers focused on:

  • Enzyme
  • Metabolism
  • Gene

Kazuyuki Shimizu mainly investigates Biochemistry, Catabolite repression, Escherichia coli, Metabolic engineering and Citric acid cycle. His work on Biochemistry deals in particular with Fermentation, 3-Hydroxypropionic acid, Klebsiella pneumoniae, 1,3-Propanediol and Aldehyde dehydrogenase. In his study, which falls under the umbrella issue of Catabolite repression, Flux, Glucose 6-phosphate, Acetate kinase and Adaptation is strongly linked to Overflow metabolism.

His Escherichia coli research is multidisciplinary, relying on both Cell, Bioinformatics, Bacterial cell structure and Metabolic pathway, Metabolism. His study looks at the relationship between Metabolic engineering and topics such as Biofuel, which overlap with Metabolite, Systems biology, GalP, Diauxie and Renewable energy. The concepts of his Citric acid cycle study are interwoven with issues in Oxidative stress, Reactive oxygen species, Oxidative phosphorylation, Transcriptional regulation and Pentose phosphate pathway.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

Multiple high-throughput analyses monitor the response of E. coli to perturbations.

Nobuyoshi Ishii;Kenji Nakahigashi;Tomoya Baba;Tomoya Baba;Martin Robert.
Science (2007)

756 Citations

Energetics and carbon metabolism during growth of microalgal cells under photoautotrophic, mixotrophic and cyclic light-autotrophic/dark-heterotrophic conditions.

Chen Yang;Qiang Hua;Kazuyuki Shimizu.
Biochemical Engineering Journal (2000)

415 Citations

Metabolic flux analysis in Synechocystis using isotope distribution from 13C-labeled glucose.

Chen Yang;Chen Yang;Qiang Hua;Kazuyuki Shimizu;Kazuyuki Shimizu.
Metabolic Engineering (2002)

274 Citations

Global metabolic regulation analysis for Escherichia coli K12 based on protein expression by 2-dimensional electrophoresis and enzyme activity measurement

Lifeng Peng;Kazuyuki Shimizu;Kazuyuki Shimizu.
Applied Microbiology and Biotechnology (2003)

256 Citations

Analysis of Gene Expression in Escherichia coli in Response to Changes of Growth-Limiting Nutrient in Chemostat Cultures

Qiang Hua;Chen Yang;Taku Oshima;Hirotada Mori;Hirotada Mori.
Applied and Environmental Microbiology (2004)

216 Citations

Metabolic flux analysis of Escherichia coli K12 grown on 13C-labeled acetate and glucose using GC-MS and powerful flux calculation method.

Jiao Zhao;Kazuyuki Shimizu;Kazuyuki Shimizu.
Journal of Biotechnology (2003)

207 Citations

Responses of the Central Metabolism in Escherichia coli to Phosphoglucose Isomerase and Glucose-6-Phosphate Dehydrogenase Knockouts

Qiang Hua;Chen Yang;Tomoya Baba;Hirotada Mori;Hirotada Mori.
Journal of Bacteriology (2003)

201 Citations

Regulation Systems of Bacteria such as Escherichia coli in Response to Nutrient Limitation and Environmental Stresses

Kazuyuki Shimizu.
Metabolites (2013)

189 Citations

The effect of pfl gene knockout on the metabolism for optically pure D-lactate production by Escherichia coli.

J. Zhu;K. Shimizu;K. Shimizu.
Applied Microbiology and Biotechnology (2004)

186 Citations

Metabolic flux analysis of pykF gene knockout Escherichia coli based on 13C-labeling experiments together with measurements of enzyme activities and intracellular metabolite concentrations

K. Al Zaid Siddiquee;M. J. Arauzo-Bravo;K. Shimizu;K. Shimizu.
Applied Microbiology and Biotechnology (2004)

183 Citations

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