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Microbiology
Mexico
2026

D-Index & Metrics

Microbiology

D-Index
70
Citations
12978
World Ranking
1984
National Ranking
1

Research.com Recognitions

  • 2026 - Research.com Microbiology in Mexico Leader Award
  • 2025 - Research.com Microbiology in Mexico Leader Award

Overview

Carlos F. Arias is affiliated with the National Autonomous University of Mexico in Mexico and has contributed extensively to the field of medicine, with a strong focus on infectious diseases. Their research spans multiple subfields including infectious diseases, genetics, animal science and zoology, molecular biology, and cardiology and cardiovascular medicine.

The scientist's recent publications reflect a concentration on viral infections, particularly those related to SARS-CoV-2 and other viruses affecting humans and animals. Key recent papers include:

  • Metagenomic sequencing with spiked primer enrichment for viral diagnostics and genomic surveillance, 2020, Nature Microbiology
  • Saliva Sampling and Its Direct Lysis, an Excellent Option To Increase the Number of SARS-CoV-2 Diagnostic Tests in Settings with Supply Shortages, 2020, Journal of Clinical Microbiology
  • The gut virome of healthy children during the first year of life is diverse and dynamic, 2021, PLoS ONE
  • Genomic Analysis of Early SARS-CoV-2 Variants Introduced in Mexico, 2020, Journal of Virology
  • Genetic Analysis of SARS-CoV-2 Variants in Mexico during the First Year of the COVID-19 Pandemic, 2021, Viruses

Frequent coauthors collaborating with the scientist include:

  • Susana López
  • Blanca Taboada
  • José Esteban Muñoz-Medina
  • Alejandro Sánchez-Flores
  • Pavel Iša

Published work is predominantly found in prominent venues such as:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Journal of Virology
  • Viruses
  • Microbiology Spectrum
  • Nature Microbiology

Carlos F. Arias's research addresses major topics including:

  • Viral gastroenteritis research and epidemiology
  • SARS-CoV-2 and COVID-19 Research
  • Animal Virus Infections Studies
  • Virus-based gene therapy research
  • Viral Infections and Immunology Research
  • Plant Virus Research Studies
  • SARS-CoV-2 detection and testing

The scientist's work involves significant analysis of viral genomes and diagnostic techniques. This includes detailed genomic studies of SARS-CoV-2 variants circulating in Mexico and methodological innovations for viral diagnostics and surveillance. Their interdisciplinary approach connects molecular biology with epidemiological surveillance and clinical microbiology.

Best Publications

  • Establishment and cryptic transmission of Zika virus in Brazil and the Americas

    N R Faria;Joshua Quick;I M Claro;J Thézé

  • Dengue 2 Virus NS2B and NS3 Form a Stable Complex That Can Cleave NS3 within the Helicase Domain

    Carlos F. Arias;Frank Preugschat;James H. Strauss

  • Integrin alpha(v)beta(3) mediates rotavirus cell entry.

    Carlos A. Guerrero;Ernesto Méndez;Selene Zárate;Pavel Isa

  • Multistep entry of rotavirus into cells: a Versaillesque dance

    Susana López;Carlos F. Arias

  • Inhibitory effects of human and bovine milk constituents on rotavirus infections.

    A.S. Kvistgaard;L.T. Pallesen;C.F. Arias;S. López

  • A Metagenomic Analysis of Pandemic Influenza A (2009 H1N1) Infection in Patients from North America

    Alexander L. Greninger;Eunice C. Chen;Taylor Sittler;Alex Scheinerman

  • Heat shock cognate protein 70 is involved in rotavirus cell entry

    Carlos A. Guerrero;Daniela Bouyssounade;Selene Zárate;Pavel Iša

  • Structural polypeptides of simian rotavirus SA11 and the effect of trypsin.

    R T Espejo;S López;C Arias

  • Trypsin activation pathway of rotavirus infectivity.

    C F Arias;P Romero;V Alvarez;S López

  • Infectivity and genome persistence of rotavirus and astrovirus in groundwater and surface water

    Ana Cecilia Espinosa;Marisa Mazari-Hiriart;Rafaela Espinosa;Liliana Maruri-Avidal

  • Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat

    M. Lisandra Zepeda Mendoza;Zijun Xiong;Marina Escalera-Zamudio;Anne Kathrine Runge

  • Metagenomic sequencing with spiked primer enrichment for viral diagnostics and genomic surveillance

    Xianding Deng;Asmeeta Achari;Scot Federman;Guixia Yu

  • Silencing the morphogenesis of rotavirus.

    Tomas López;Minerva Camacho;Margarita Zayas;Rebeca Nájera

  • The rotavirus surface protein VP8 modulates the gate and fence function of tight junctions in epithelial cells

    Porfirio Nava;Susana López;Carlos F. Arias;Socorro Islas

  • Characterization of Rotavirus Cell Entry

    Claudia Sánchez-San Martín;Tomás López;Carlos F. Arias;Susana López

  • Discovery of a novel polyomavirus in acute diarrheal samples from children.

    Guixia Yu;Alexander L. Greninger;Pavel Isa;Tung G. Phan

  • Rotavirus Infection Induces the Phosphorylation of eIF2α but Prevents the Formation of Stress Granules

    Hilda Montero;Margarito Rojas;Carlos F. Arias;Susana López

  • Role of sialic acids in rotavirus infection.

    Pavel Isa;Carlos F. Arias;Susana López

  • Interaction of rotaviruses with Hsc70 during cell entry is mediated by VP5.

    Selene Zárate;Mariela A. Cuadras;Rafaela Espinosa;Pedro Romero

  • The Astrovirus Capsid: A Review

    Carlos F Arias;Rebecca M DuBois

  • Rotavirus gene silencing by small interfering RNAs.

    Miguel Angel Déctor;Pedro Romero;Susana López;Carlos F. Arias

Frequent Co-Authors

Susana López
Susana López National Autonomous University of Mexico
Charles Y. Chiu
Charles Y. Chiu University of California, San Francisco
Oliver G. Pybus
Oliver G. Pybus University of Oxford
Harry B. Greenberg
Harry B. Greenberg Stanford University
James H. Strauss
James H. Strauss California Institute of Technology
Nuno Rodrigues Faria
Nuno Rodrigues Faria Imperial College London
Moritz U G Kraemer
Moritz U G Kraemer University of Oxford
Romilio T. Espejo
Romilio T. Espejo University of Chile
Andrew Rambaut
Andrew Rambaut University of Edinburgh
Alexander L. Greninger
Alexander L. Greninger University of Washington

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