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Genetics

D-Index
69
Citations
21685
World Ranking
2328
National Ranking
1050

Overview

Martha L. Bulyk is affiliated with Harvard University in the United States. Their research outputs primarily focus on the field of Biochemistry, Genetics and Molecular Biology, with a strong emphasis on Molecular Biology. Additional subfields include Neurology, Genetics, Cancer Research, and Radiology, Nuclear Medicine and Imaging.

The main research topics covered by Martha L. Bulyk include:

  • Genomics and Chromatin Dynamics
  • Renal and related cancers
  • RNA modifications and cancer
  • Epigenetics and DNA Methylation
  • RNA and protein synthesis mechanisms
  • Neuroblastoma Research and Treatments
  • RNA Research and Splicing

Their recent published papers demonstrate a focus on gene regulation and cancer biology. Notable publications include:

  • "EP300 Selectively Controls the Enhancer Landscape of MYCN-Amplified Neuroblastoma", 2021, Cancer Discovery
  • "Transcriptional Silencers: Driving Gene Expression with the Brakes On", 2021, Trends in Genetics
  • "Zinc Finger Protein SALL4 Functions through an AT-Rich Motif to Regulate Gene Expression", 2021, Cell Reports
  • "LIN28B regulates transcription and potentiates MYCN-induced neuroblastoma through binding to ZNF143 at target gene promotors", 2020, Proceedings of the National Academy of Sciences
  • "Common variants in signaling transcription-factor-binding sites drive phenotypic variability in red blood cell traits", 2020, Nature Genetics

The frequent coauthors collaborating with Martha L. Bulyk include:

  • Luca Mariani
  • Stephen S. Gisselbrecht
  • Brian J. Abraham
  • Sabrina K. Phanor
  • Adam D. Durbin

Their research has appeared multiple times in venues such as:

  • Trends in Genetics
  • bioRxiv (Cold Spring Harbor Laboratory)
  • SSRN Electronic Journal
  • Cancer Research
  • Cancer Discovery

Best Publications

  • Diversity and Complexity in DNA Recognition by Transcription Factors

    Gwenael Badis;Michael F. Berger;Michael F. Berger;Anthony A. Philippakis;Anthony A. Philippakis;Anthony A. Philippakis;Shaheynoor Talukder

  • STAT3 Activation of miR-21 and miR-181b-1 via PTEN and CYLD Are Part of the Epigenetic Switch Linking Inflammation to Cancer

    Dimitrios Iliopoulos;Savina A. Jaeger;Heather A. Hirsch;Martha L. Bulyk;Martha L. Bulyk

  • The multiple mechanisms that regulate p53 activity and cell fate

    Antonina Hafner;Martha L Bulyk;Ashwini Jambhekar;Galit Lahav

  • Compact, universal DNA microarrays to comprehensively determine transcription-factor binding site specificities

    Michael F Berger;Michael F Berger;Anthony A Philippakis;Anthony A Philippakis;Anthony A Philippakis;Aaron M Qureshi;Aaron M Qureshi;Fangxue S He;Fangxue S He

  • Variation in Homeodomain DNA Binding Revealed by High-Resolution Analysis of Sequence Preferences

    Michael F. Berger;Gwenael Badis;Andrew R. Gehrke;Shaheynoor Talukder

  • Genome-Wide Analysis of ETS-Family DNA-Binding In Vitro and In Vivo

    Gong-Hong Wei;Gwenael Badis;Michael F. Berger;Teemu Kivioja;Teemu Kivioja

  • Rapid Analysis of the DNA Binding Specificities of Transcription Factors with DNA Microarrays

    Sonali Mukherjee;Sonali Mukherjee;Michael F Berger;Ghil Jona;Xun S Wang;Xun S Wang

  • Universal protein-binding microarrays for the comprehensive characterization of the DNA-binding specificities of transcription factors.

    Michael F Berger;Martha L Bulyk

  • High-resolution DNA-binding specificity analysis of yeast transcription factors

    Cong Zhu;Kelsey J.R.P. Byers;Rachel Patton McCord;Zhenwei Shi

  • UniPROBE: an online database of protein binding microarray data on protein–DNA interactions

    Daniel E. Newburger;Martha Leonia Bulyk

  • Additivity in protein–DNA interactions: how good an approximation is it?

    Panayiotis V. Benos;Martha L. Bulyk;Gary D. Stormo

  • Nucleotides of transcription factor binding sites exert interdependent effects on the binding affinities of transcription factors

    Martha L. Bulyk;Philip L. F. Johnson;George M. Church

  • Evaluation of methods for modeling transcription factor sequence specificity

    Matthew T Weirauch;Atina Cote;Raquel Norel;Matti Annala

  • Exploring the DNA-binding specificities of zinc fingers with DNA microarrays

    Martha L. Bulyk;Xiaohua Huang;Yen Choo;George M. Church

  • Computational prediction of transcription-factor binding site locations

    Martha Leonia Bulyk

  • Direct Promoter Repression by BCL11A Controls the Fetal to Adult Hemoglobin Switch

    Nan Liu;Victoria V. Hargreaves;Qian Zhu;Jesse V. Kurland

  • A Transcriptional Signature and Common Gene Networks Link Cancer with Lipid Metabolism and Diverse Human Diseases

    Heather A. Hirsch;Dimitrios Iliopoulos;Amita Joshi;Yong Zhang

  • UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein–DNA interactions

    Maxwell A. Hume;Maxwell A. Hume;Luis A. Barrera;Luis A. Barrera;Luis A. Barrera;Stephen S. Gisselbrecht;Martha L. Bulyk

  • Genomic regions flanking E-box binding sites influence DNA binding specificity of bHLH transcription factors through DNA shape

    Raluca Gordân;Ning Shen;Iris Dror;Tianyin Zhou

  • Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo This is an open-access article distributed under the terms of the Creative Commons Attribution Noncommercial Share Alike 3.0 Unported License, which allows readers to alter, transform, or build upon the article and then distribute the resultingworkunderthesameorsimilarlicensetothisone.Theworkmustbeattributedbacktotheoriginalauthorand commercial use is not permitted without specific permission.

    Gong-Hong Wei;Gwenael Badis;Michael F Berger;Teemu Kivioja

Frequent Co-Authors

Michael F. Berger
Michael F. Berger Memorial Sloan Kettering Cancer Center
George M. Church
George M. Church Harvard University
Richard L. Maas
Richard L. Maas Brigham and Women's Hospital
Alexander J. Hartemink
Alexander J. Hartemink Duke University
Quaid Morris
Quaid Morris Memorial Sloan Kettering Cancer Center
Peter J. Park
Peter J. Park Harvard University
Michael Y. Tolstorukov
Michael Y. Tolstorukov Harvard University
Jussi Taipale
Jussi Taipale University of Cambridge
Philip L. De Jager
Philip L. De Jager Columbia University

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