World's Best Scientists 2026 revealed!

D-Index & Metrics

Molecular Biology

D-Index
47
Citations
10254
World Ranking
2732
National Ranking
1321

Jonathan Livny publication distribution in Molecular Biology in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Molecular Biology in 2026. The highlighted bar marks where Jonathan Livny sits on this spectrum.

47–56 publications: 7 scientists 57–66 publications: 17 scientists 67–76 publications: 65 scientists 77–86 publications: 90 scientists 87–96 publications: 125 scientists 97–106 publications: 131 scientists 107–116 publications: 162 scientists 117–126 publications: 177 scientists 127–136 publications: 158 scientists 137–146 publications: 158 scientists 147–156 publications: 146 scientists 157–166 publications: 159 scientists 167–176 publications: 131 scientists 177–186 publications: 110 scientists 187–196 publications: 112 scientists 197–206 publications: 100 scientists 207–216 publications: 89 scientists 217–226 publications: 98 scientists 227–236 publications: 74 scientists 237–246 publications: 72 scientists 247–256 publications: 63 scientists 257–266 publications: 53 scientists 267–276 publications: 54 scientists 277–286 publications: 49 scientists 287–296 publications: 52 scientists 297–306 publications: 43 scientists 307–316 publications: 46 scientists 317–326 publications: 41 scientists 327–336 publications: 42 scientists 337–346 publications: 31 scientists 347–356 publications: 28 scientists 357–366 publications: 29 scientists 367–376 publications: 26 scientists 377–386 publications: 24 scientists 387–396 publications: 24 scientists 397–406 publications: 14 scientists 407–416 publications: 13 scientists 417–426 publications: 20 scientists 427–436 publications: 12 scientists 437–446 publications: 20 scientists 447–456 publications: 11 scientists 457–466 publications: 10 scientists 467–476 publications: 14 scientists 477–486 publications: 14 scientists 487–496 publications: 10 scientists 497–506 publications: 13 scientists 507–516 publications: 13 scientists 517–526 publications: 2 scientists 527–536 publications: 4 scientists 537–546 publications: 6 scientists 547–556 publications: 8 scientists 557–563 publications: 6 scientists 564+ publications: 100 scientists
47 publications 564+

This scientist: 69 publications — 1st percentile

1% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 564 publications or more.

Jonathan Livny D-index placement in Molecular Biology in 2026

The chart shows the D-index (discipline H-index) distribution of Molecular Biology scientists ranked by Research.com in 2026. The highlighted bar marks where Jonathan Livny sits on this spectrum.

40–41 D-Index: 36 scientists 42–43 D-Index: 101 scientists 44–45 D-Index: 115 scientists 46–47 D-Index: 121 scientists 48–49 D-Index: 118 scientists 50–51 D-Index: 130 scientists 52–53 D-Index: 106 scientists 54–55 D-Index: 116 scientists 56–57 D-Index: 113 scientists 58–59 D-Index: 129 scientists 60–61 D-Index: 120 scientists 62–63 D-Index: 105 scientists 64–65 D-Index: 131 scientists 66–67 D-Index: 95 scientists 68–69 D-Index: 97 scientists 70–71 D-Index: 106 scientists 72–73 D-Index: 83 scientists 74–75 D-Index: 89 scientists 76–77 D-Index: 77 scientists 78–79 D-Index: 70 scientists 80–81 D-Index: 73 scientists 82–83 D-Index: 60 scientists 84–85 D-Index: 48 scientists 86–87 D-Index: 45 scientists 88–89 D-Index: 50 scientists 90–91 D-Index: 31 scientists 92–93 D-Index: 51 scientists 94–95 D-Index: 43 scientists 96–97 D-Index: 38 scientists 98–99 D-Index: 39 scientists 100–101 D-Index: 41 scientists 102–103 D-Index: 29 scientists 104–105 D-Index: 33 scientists 106–107 D-Index: 35 scientists 108–109 D-Index: 20 scientists 110–111 D-Index: 38 scientists 112–113 D-Index: 19 scientists 114–115 D-Index: 28 scientists 116–117 D-Index: 13 scientists 118–119 D-Index: 23 scientists 120–121 D-Index: 16 scientists 122–123 D-Index: 15 scientists 124–125 D-Index: 11 scientists 126–127 D-Index: 21 scientists 128–129 D-Index: 7 scientists 130–131 D-Index: 13 scientists 132–133 D-Index: 14 scientists 134–135 D-Index: 17 scientists 136–137 D-Index: 9 scientists 138–139 D-Index: 8 scientists 140–141 D-Index: 16 scientists 142–143 D-Index: 7 scientists 144 D-Index: 7 scientists 145+ D-Index: 100 scientists
40 D-Index 145+

This scientist: 47 D-Index — 12th percentile

12% of scientists in this discipline score the same or lower.

The last bar groups every scientist with 145 D-Index or more.

Overview

Jonathan Livny is affiliated with the Broad Institute in the United States. Their research spans multiple fields, primarily within Medicine and Biochemistry, Genetics, and Molecular Biology. The work focuses on several subfields, including Infectious Diseases, Molecular Biology, Pharmacology, Ecology, and Biomedical Engineering.

The scientist has contributed to topics such as SARS-CoV-2 and COVID-19 research, SARS-CoV-2 detection and testing, bacteriophages and microbial interactions, gut microbiota and health, genomics and phylogenetic studies, COVID-19 clinical research studies, and antibiotic resistance in bacteria.

Notable recent papers include:

  • Best practices on the differential expression analysis of multi-species RNA-seq, 2021, Genome Biology
  • Uropathogenic Escherichia coli infection-induced epithelial trained immunity impacts urinary tract disease outcome, 2023, Nature Microbiology
  • SARS-CoV-2 antibody persistence in COVID-19 convalescent plasma donors: Dependency on assay format and applicability to serosurveillance, 2021, Transfusion
  • Genetic determinants facilitating the evolution of resistance to carbapenem antibiotics, 2021, eLife
  • Multiplexed detection of bacterial nucleic acids using Cas13 in droplet microarrays, 2022, PNAS Nexus

Jonathan Livny frequently publishes in venues such as bioRxiv (Cold Spring Harbor Laboratory), Open Forum Infectious Diseases, Genome Biology, Nature Microbiology, and Transfusion.

Their work involves collaboration with several co-authors, including Deborah T. Hung, Peijun Ma, Marek Orzechowski, Ashlee M. Earl, and Roby P. Bhattacharyya.

Best Publications

  • Nucleic acid detection with CRISPR-Cas13a/C2c2

    Jonathan S. Gootenberg;Omar O. Abudayyeh;Jeong Wook Lee;Patrick Essletzbichler

  • A library of human gut bacterial isolates paired with longitudinal multiomics data enables mechanistic microbiome research

    M. Poyet;M. Poyet;M. Groussin;M. Groussin;S. M. Gibbons;J. Avila-Pacheco

  • Bacteriophage control of Shiga toxin 1 production and release by Escherichia coli

    Patrick L. Wagner;Jonathan Livny;Melody N. Neely;David W. K. Acheson

  • Simultaneous generation of many RNA-seq libraries in a single reaction

    Alexander A Shishkin;Georgia Giannoukos;Alper Kucukural;Dawn Ciulla

  • Distribution of Centromere-Like parS Sites in Bacteria: Insights from Comparative Genomics

    Jonathan Livny;Yoshiharu Yamaichi;Matthew K. Waldor

  • Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes

    Georgia Giannoukos;Dawn M Ciulla;Katherine Huang;Brian J Haas

  • How deep is deep enough for RNA-Seq profiling of bacterial transcriptomes?

    Brian J Haas;Melissa Chin;Chad Nusbaum;Bruce W Birren

  • High-throughput, kingdom-wide prediction and annotation of bacterial non-coding RNAs.

    Jonathan Livny;Hidayat Teonadi;Miron Livny;Matthew K. Waldor

  • Identification of small RNAs in diverse bacterial species.

    Jonathan Livny;Matthew K Waldor

  • RNA-Seq-Based Monitoring of Infection-Linked Changes in Vibrio cholerae Gene Expression

    Anjali Mandlik;Jonathan Livny;Jonathan Livny;Jonathan Livny;William P. Robins;Jennifer M. Ritchie;Jennifer M. Ritchie

  • Identification of 17 Pseudomonas aeruginosa sRNAs and prediction of sRNA-encoding genes in 10 diverse pathogens using the bioinformatic tool sRNAPredict2

    Jonathan Livny;Anja Brencic;Stephen Lory;Matthew K. Waldor

  • TargetRNA2: identifying targets of small regulatory RNAs in bacteria

    Mary Beth Kery;Monica Feldman;Jonathan Livny;Brian Tjaden

  • Experimental discovery of sRNAs in Vibrio cholerae by direct cloning, 5S/tRNA depletion and parallel sequencing

    Jane M. Liu;Jonathan Livny;Michael S. Lawrence;Marc D. Kimball

  • Characterizing spontaneous induction of Stx encoding phages using a selectable reporter system

    Jonathan Livny;David I. Friedman

  • Multiple small RNAs identified in Mycobacterium bovis BCG are also expressed in Mycobacterium tuberculosis and Mycobacterium smegmatis

    Jeanne M. DiChiara;Lydia M. Contreras-Martinez;Jonathan Livny;Dorie Smith

  • Bacterial virulence phenotypes of Escherichia coli and host susceptibility determine risk for urinary tract infections

    Henry L. Schreiber;Henry L. Schreiber;Matt S. Conover;Wen Chi Chou;Michael E. Hibbing

  • High-resolution definition of the Vibrio cholerae essential gene set with hidden Markov model–based analyses of transposon-insertion sequencing data

    Michael C. Chao;Justin R. Pritchard;Yanjia J. Zhang;Eric J. Rubin

  • sRNAPredict: an integrative computational approach to identify sRNAs in bacterial genomes

    Jonathan Livny;Michael A. Fogel;Brigid M. Davis;Matthew K. Waldor

  • NanoRNAs prime transcription initiation in vivo

    Seth R. Goldman;Josh S. Sharp;Irina O. Vvedenskaya;Jonathan Livny;Jonathan Livny

  • Mining regulatory 5′UTRs from cDNA deep sequencing datasets

    Jonathan Livny;Matthew K. Waldor

Frequent Co-Authors

Deborah T. Hung
Deborah T. Hung Harvard University
Matthew K. Waldor
Matthew K. Waldor Harvard Medical School
Scott J. Hultgren
Scott J. Hultgren Washington University in St. Louis
Ashlee M. Earl
Ashlee M. Earl Broad Institute
Alain Charbit
Alain Charbit Université Paris Cité
Marco Colonna
Marco Colonna Washington University in St. Louis
Aviv Regev
Aviv Regev Genentech
David I. Friedman
David I. Friedman University of Michigan–Ann Arbor
Andreas Gnirke
Andreas Gnirke Broad Institute
Pardis C. Sabeti
Pardis C. Sabeti Harvard University

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