World's Best Scientists 2026 revealed!

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Microbiology

D-Index
47
Citations
8520
World Ranking
4787
National Ranking
1846

Overview

Andrew P. Rice is affiliated with Baylor College of Medicine in the United States. Their research spans multiple fields including Medicine and Computer Science, with particular focus on infectious diseases and information systems.

The scientist has contributed notably to both medical and computational research domains. Their work covers main topics such as HIV research and treatment, software engineering research, SARS-CoV-2 and COVID-19 research, scientific computing and data management, HIV/AIDS drug development and treatment, natural compounds in disease treatment, and advanced database systems and queries.

They have published articles in a variety of venues, including well-known repositories and journals. Frequent publication venues include:

  • arXiv (Cornell University)
  • bioRxiv (Cold Spring Harbor Laboratory)
  • Communications of the ACM
  • Frontiers in Immunology
  • Future Virology

Among the recent papers by or associated with their research are the following:

  • "Measuring GitHub Copilot's Impact on Productivity", 2024, Communications of the ACM
  • "Serum IgG anti-SARS-CoV-2 Binding Antibody Level Is Strongly Associated With IgA and Functional Antibody Levels in Adults Infected With SARS-CoV-2", 2021, Frontiers in Immunology
  • "Tuneful: An Online Significance-Aware Configuration Tuner for Big Data Analytics", 2020, arXiv (Cornell University)
  • "SARS-CoV-2 Likely Targets Cellular Pdz Proteins: A Common Tactic of Pathogenic Viruses", 2021, Future Virology
  • "Productivity Assessment of Neural Code Completion", 2022, arXiv (Cornell University)

Collaborations have been a notable aspect of their scholarly work. Frequent co-authors include:

  • Jason T. Kimata
  • Albert Ziegler
  • Eirini Kalliamvakou
  • Devon Rifkin
  • Shawn Simister

The scientist's subfields of study further detail their interdisciplinary focus, covering infectious diseases, information systems, virology, computer networks and communications, and information systems and management.

Best Publications

  • HIV-1 Tat protein increases transcriptional initiation and stabilizes elongation.

    Michael F. Laspia;Andrew P. Rice;Michael B. Mathews

  • The interaction between HIV-1 Tat and human cyclin T1 requires zinc and a critical cysteine residue that is not conserved in the murine CycT1 protein

    Mitchell E. Garber;Ping Wei;Vineet N. KewalRamani;Timothy P. Mayall

  • Lentivirus Tat proteins specifically associate with a cellular protein kinase, TAK, that hyperphosphorylates the carboxyl-terminal domain of the large subunit of RNA polymerase II: candidate for a Tat cofactor.

    C H Herrmann;A P Rice

  • miR-198 Inhibits HIV-1 Gene Expression and Replication in Monocytes and Its Mechanism of Action Appears To Involve Repression of Cyclin T1

    Tzu-Ling Sung;Andrew P. Rice

  • Emerging Theme: Cellular PDZ Proteins as Common Targets of Pathogenic Viruses

    Ronald T. Javier;Andrew P. Rice

  • TAK, an HIV Tat-associated kinase, is a member of the cyclin-dependent family of protein kinases and is induced by activation of peripheral blood lymphocytes and differentiation of promonocytic cell lines

    Xinzhen Yang;Moses O. Gold;Derek N.G. Tang;Dorothy E. Lewis

  • Regulation of Cyclin T1 and HIV-1 Replication by MicroRNAs in Resting CD4+ T Lymphocytes

    Karen Chiang;Tzu-Ling Sung;Andrew P. Rice

  • Transcriptional but not translational regulation of HIV-1 by the tat gene product

    Andrew P. Rice;Michael B. Mathews

  • Tat-Associated Kinase, TAK, Activity Is Regulated by Distinct Mechanisms in Peripheral Blood Lymphocytes and Promonocytic Cell Lines

    Christine H. Herrmann;Richard G. Carroll;Ping Wei;Katherine A. Jones

  • The human immunodeficiency virus Tat proteins specifically associate with TAK in vivo and require the carboxyl-terminal domain of RNA polymerase II for function.

    X Yang;C H Herrmann;A P Rice

  • Specific Interaction of the Human Immunodeficiency Virus Tat Proteins with a Cellular Protein Kinase

    Christine H. Herrmann;Andrew P. Rice

  • Tat-responsive region RNA of human immunodeficiency virus 1 can prevent activation of the double-stranded-RNA-activated protein kinase

    Shobha Gunnery;Andrew P. Rice;Hugh D. Robertson;Michael B. Mathews

  • PITALRE, the Catalytic Subunit of TAK, Is Required for Human Immunodeficiency Virus Tat Transactivation In Vivo

    Moses O. Gold;Xinzhen Yang;Christine H. Herrmann;Andrew P. Rice

  • The Avian Influenza Virus NS1 ESEV PDZ Binding Motif Associates with Dlg1 and Scribble To Disrupt Cellular Tight Junctions

    Lisa Golebiewski;Hongbing Liu;Ronald T. Javier;Andrew P. Rice

  • Mutational analysis of the conserved cysteine-rich region of the human immunodeficiency virus type 1 Tat protein.

    A P Rice;F Carlotti

  • Vaccinia virus induces cellular mRNA degradation.

    A P Rice;B E Roberts

  • Synergy between HIV-1 Tat and adenovirus E1A is principally due to stabilization of transcriptional elongation.

    Michael F. Laspia;Andrew P. Rice;Michael B. Mathews

  • Induction of TAK (Cyclin T1/P-TEFb) in Purified Resting CD4+ T Lymphocytes by Combination of Cytokines

    Romi Ghose;Li-Ying Liou;Christine H. Herrmann;Andrew P. Rice

  • The ESEV PDZ-Binding Motif of the Avian Influenza A Virus NS1 Protein Protects Infected Cells from Apoptosis by Directly Targeting Scribble

    Hongbing Liu;Lisa Golebiewski;Eugene C. Dow;Robert M. Krug

  • Interferon-mediated, double-stranded RNA-dependent protein kinase is inhibited in extracts from vaccinia virus-infected cells.

    A P Rice;I M Kerr

Frequent Co-Authors

Michael B. Mathews
Michael B. Mathews Rutgers, The State University of New Jersey
Dorothy E. Lewis
Dorothy E. Lewis The University of Texas Health Science Center at Houston
Bert W. O'Malley
Bert W. O'Malley Baylor College of Medicine
Joseph K. Wong
Joseph K. Wong University of California, San Francisco
Katherine A. Jones
Katherine A. Jones Salk Institute for Biological Studies
Lawrence A. Donehower
Lawrence A. Donehower Baylor College of Medicine
James M. Tour
James M. Tour Rice University
Vicente Planelles
Vicente Planelles University of Utah
John W. Belmont
John W. Belmont Baylor College of Medicine
Hulin Wu
Hulin Wu The University of Texas Health Science Center at Houston

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