Matthew R. Henn

Overview

Best Publications

• The major genetic determinants of HIV-1 control affect HLA class I peptide presentation

  Pereyra F;Jia X;McLaren Pj

  1679
  Citations

• NATURALLY OCCURRING DOMINANT RESISTANCE MUTATIONS TO HEPATITIS C VIRUS PROTEASE AND POLYMERASE INHIBITORS IN TREATMENT-NAIVE PATIENTS

  Thomas Kuntzen;Joerg Timm;Andrew Berical;Niall Lennon

  438
  Citations

• Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection

  Matthew R. Henn;Christian L. Boutwell;Patrick Charlebois;Niall J Lennon

  401
  Citations

• Genomics of the fungal kingdom: Insights into eukaryotic biology

  James E. Galagan;Matthew R. Henn;Li-Jun Ma;Christina A. Cuomo

  382
  Citations

• Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives

  Thomas J. Sharpton;Jason E. Stajich;Steven D. Rounsley;Malcolm J. Gardner

  367
  Citations

• Dynamics of Dengue Disease Severity Determined by the Interplay Between Viral Genetics and Serotype-Specific Immunity

  Molly OhAinle;Angel Balmaseda;Alexander R. Macalalad;Yolanda Tellez

  365
  Citations

• Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments

  Matthew B. Sullivan;Matthew B. Sullivan;Katherine H. Huang;Julio C. Ignacio-Espinoza;Aaron M. Berlin

  360
  Citations

• Whole genome amplification and de novo assembly of single bacterial cells.

  Sébastien Rodrigue;Rex R. Malmstrom;Aaron M. Berlin;Bruce W. Birren

  356
  Citations

• A Novel Microbiome Therapeutic Increases Gut Microbial Diversity and Prevents Recurrent Clostridium difficile Infection

  Sahil Khanna;Darrell S. Pardi;Colleen R. Kelly;Colleen S. Kraft

  341
  Citations

• Short-Term Temporal Variability in Airborne Bacterial and Fungal Populations

  Noah Fierer;Noah Fierer;Zongzhi Liu;Mari Rodríguez-Hernández;Rob Knight

  326
  Citations

• Synergistic bacterial compositions and methods of production and use thereof

  Matthew R. Henn;Geoffrey von Maltzahn;Anthony Mario D'Onofrio;Kevin Daniel Litcofsky

  311
  Citations

• Enabling a community to dissect an organism: overview of the Neurospora functional genomics project.

  Jay C. Dunlap;Katherine A. Borkovich;Matthew R. Henn;Gloria E. Turner

  258
  Citations

• Rapid diversification of coevolving marine Synechococcus and a virus

  Marcia F. Marston;Francis J. Pierciey;Alicia Shepard;Gary Gearin

  242
  Citations

• The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes.

  Florent E. Angly;Dana Willner;Alejandra Prieto-Davó;Robert A. Edwards;Robert A. Edwards

  237
  Citations

• Fecal microbiota transplantation for the improvement of metabolism in obesity: The FMT-TRIM double-blind placebo-controlled pilot trial

  Elaine W. Yu;Liu Gao;Petr Stastka;Michael C. Cheney

  233
  Citations

• Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control

  Daniel E. Neafsey;Bridget M. Barker;Thomas J. Sharpton;Jason E. Stajich

  221
  Citations

• De novo assembly of highly diverse viral populations

  Xiao Yang;Patrick Charlebois;Sante Gnerre;Matthew G Coole

  219
  Citations

• Ectomycorrhizal fungi introduced with exotic pine plantations induce soil carbon depletion

  Ignacio H. Chapela;Laurie J. Osher;Thomas R. Horton;Matthew R. Henn

  207
  Citations

• Comparative Genomic Analysis of Human Fungal Pathogens Causing Paracoccidioidomycosis

  Christopher A. Desjardins;Mia D. Champion;Jason W. Holder;Jason W. Holder;Anna Muszewska

  200
  Citations

• Fecal microbiota transplantation for the improvement of metabolism in obesity: The FMT-TRIM double-blind placebo-controlled pilot trial

  Yu Ew;Gao L;Stastka P;Cheney Mc

  8
  Citations