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Huub C. J. Hoefsloot

Huub C. J. Hoefsloot

D-Index & Metrics

Engineering and Technology

D-Index
40
Citations
11613
World Ranking
7157
National Ranking
141

Overview

Huub C. J. Hoefsloot is affiliated with the University of Amsterdam in the Netherlands. Their research encompasses biochemistry, genetics, and molecular biology, with a primary focus on metabolomics and mass spectrometry studies.

Their recent publications include:

  • Integrative Analysis of Proteome and Transcriptome Dynamics during Bacillus subtilis Spore Revival, 2020, mSphere
  • Human Blood Lipoprotein Predictions from 1 H NMR Spectra: Protocol, Model Performances, and Cage of Covariance, 2021, Analytical Chemistry
  • Exploring dynamic metabolomics data with multiway data analysis: a simulation study, 2022, BMC Bioinformatics
  • Analyzing postprandial metabolomics data using multiway models: a simulation study, 2024, BMC Bioinformatics
  • In plants distal regulatory sequences overlap with unmethylated rather than low-methylated regions, in contrast to mammals, 2020, bioRxiv (Cold Spring Harbor Laboratory)

Frequent coauthors include:

  • Age K. Smilde (8 publications)
  • Evrim Acar (6 publications)
  • Barbara M. Bakker (4 publications)
  • Morten Arendt Rasmussen (4 publications)
  • Elena Merino Tejero (3 publications)

Their frequent publication venues encompass:

  • bioRxiv (Cold Spring Harbor Laboratory) with 4 publications
  • BMC Bioinformatics with 2 publications
  • Research Square (Research Square) with 2 publications
  • mSphere with 1 publication
  • Analytical Chemistry with 1 publication

The main fields of study focus on biochemistry, genetics, and molecular biology supported by subfields including molecular biology, computational mathematics, analytical chemistry, plant science, and computational theory and mathematics.

Key subfields of study are:

  • Molecular Biology (12 publications)
  • Computational Mathematics (4 publications)
  • Analytical Chemistry (3 publications)
  • Plant Science (3 publications)
  • Computational Theory and Mathematics (2 publications)

The main topics covered in their work include:

  • Metabolomics and Mass Spectrometry Studies (14 publications)
  • Tensor decomposition and applications (8 publications)
  • Spectroscopy and Chemometric Analyses (6 publications)
  • Gene expression and cancer classification (4 publications)
  • Computational Drug Discovery Methods (4 publications)
  • Music Technology and Sound Studies (4 publications)
  • Music and Audio Processing (4 publications)

Best Publications

  • Centering, scaling, and transformations: improving the biological information content of metabolomics data

    Robert A van den Berg;Huub C J Hoefsloot;Johan A Westerhuis;Age K Smilde

  • Assessment of PLSDA cross validation

    Johan A. Westerhuis;Huub C. J. Hoefsloot;Suzanne Smit;Daniel J. Vis

  • ANOVA-simultaneous component analysis (ASCA): a new tool for analyzing designed metabolomics data

    Age K. Smilde;Jeroen J. Jansen;Huub C. J. Hoefsloot;Robert-Jan A. N. Lamers

  • Reflections on univariate and multivariate analysis of metabolomics data

    Edoardo Saccenti;Huub C. J. Hoefsloot;Age K. Smilde;Johan A. Westerhuis

  • Multivariate paired data analysis: multilevel PLSDA versus OPLSDA

    Johan A. Westerhuis;Ewoud J. J. van Velzen;Huub C. J. Hoefsloot;Age K. Smilde

  • Poiseuille flow to measure the viscosity of particle model fluids

    J. A. Backer;C. P. Lowe;H. C. J. Hoefsloot;P. D. Iedema

  • ASCA: Analysis of multivariate data obtained from an experimental design

    Jeroen J. Jansen;Huub C. J. Hoefsloot;Jan van der Greef;Marieke E. Timmerman

  • Capturing Arabidopsis Root Architecture Dynamics with root-fit Reveals Diversity in Responses to Salinity

    Magdalena M. Julkowska;Huub C.J. Hoefsloot;Selena Mol;Richard Feron

  • Genetic Components of Root Architecture Remodeling in Response to Salt Stress.

    Magdalena Julkowska;Iko Tamar Koevoets;Selena Mol;Huub Cj Hoefsloot

  • Data-processing strategies for metabolomics studies

    M.M.W.B. Hendriks;F.A. van Eeuwijk;R.H. Jellema;J.A. Westerhuis

  • Assessing the statistical validity of proteomics based biomarkers.

    Suzanne Smit;Mariëlle J. van Breemen;Huub C.J. Hoefsloot;Age K. Smilde

  • Multilevel data analysis of a crossover designed human nutritional intervention study.

    Ewoud J J van Velzen;Johan A Westerhuis;John P M van Duynhoven;Ferdi A van Dorsten

  • A critical assessment of feature selection methods for biomarker discovery in clinical proteomics

    Christin Christin;Huub C.J. Hoefsloot;Huub C.J. Hoefsloot;Age K. Smilde;Age K. Smilde;Berend Hoekman

  • ANOVA–principal component analysis and ANOVA–simultaneous component analysis: a comparison

    Gooitzen Zwanenburg;Huub C.J. Hoefsloot;Johan A. Westerhuis;Jeroen J. Jansen

  • Dynamic metabolomic data analysis: a tutorial review

    A. K. Smilde;J. A. Westerhuis;H. C. J. Hoefsloot;S. Bijlsma

  • Selection of optimal sensor position in a tubular reactor using robust degree of observability criteria

    F.W.J. van den Berg;H.C.J. Hoefsloot;H.F.M. Boelens;A.K. Smilde

  • Modeling Molecular Weight and Degree of Branching Distribution of low density Polyethylene

    Piet D. Iedema;Michael Wulkow;Huub C. J. Hoefsloot

  • NO-SLIP BOUNDARY CONDITION IN DISSIPATIVE PARTICLE DYNAMICS

    S. M. Willemsen;H. C. J. Hoefsloot;P. D. Iedema

  • Optimized time alignment algorithm for LC-MS data: Correlation optimized warping using component detection algorithm-selected mass chromatograms

    Christin Christin;Age K. Smilde;Huub C. J. Hoefsloot;Frank Suits

  • Multilevel component analysis of time-resolved metabolic fingerprinting data

    J.J. Jansen;H.C.J. Hoefsloot;J. van der Greef;M.E. Timmerman

  • Analysis of longitudinal metabolomics data

    Jeroen J. Jansen;Huub C. J. Hoefsloot;Hans F. M. Boelens;Jan Van Der Greef

Frequent Co-Authors

Age K. Smilde
Age K. Smilde University of Amsterdam
Johan A. Westerhuis
Johan A. Westerhuis University of Amsterdam
Chris G. de Koster
Chris G. de Koster University of Amsterdam
Rainer Bischoff
Rainer Bischoff University of Groningen
Peter M. A. Sloot
Peter M. A. Sloot University of Amsterdam
Søren Balling Engelsen
Søren Balling Engelsen University of Copenhagen
Johannes M. F. G. Aerts
Johannes M. F. G. Aerts Leiden University
Stanley Brul
Stanley Brul University of Amsterdam
Bas Teusink
Bas Teusink Vrije Universiteit Amsterdam
Klaas J. Hellingwerf
Klaas J. Hellingwerf University of Amsterdam

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