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Daniel Paredes-Sabja

Daniel Paredes-Sabja

D-Index & Metrics

Microbiology

D-Index
44
Citations
5495
World Ranking
5183
National Ranking
1983

Overview

Daniel Paredes-Sabja is affiliated with Texas A&M University in the United States. Their research primarily focuses on medicine, with significant contributions in biochemistry, genetics, and molecular biology. A substantial portion of their work lies within infectious diseases, molecular biology, surgery, epidemiology, and gastroenterology.

Their research topics include:

  • Clostridium difficile and Clostridium perfringens research
  • Helicobacter pylori-related gastroenterology studies
  • Gut microbiota and health
  • Viral gastroenteritis research and epidemiology
  • Microscopic colitis
  • Gastrointestinal motility and disorders
  • Antimicrobial resistance in Staphylococcus

Daniel Paredes-Sabja has a range of recent publications across multiple scientific journals. Notable papers include:

  • "Entry of spores into intestinal epithelial cells contributes to recurrence of Clostridioides difficile infection," 2021, Nature Communications
  • "Major genetic discontinuity and novel toxigenic species in Clostridioides difficile taxonomy," 2021, eLife
  • "Comprehensive genome analyses of Sellimonas intestinalis, a potential biomarker of homeostasis gut recovery," 2020, Microbial Genomics
  • "FastMLST: A Multi-core Tool for Multilocus Sequence Typing of Draft Genome Assemblies," 2021, Bioinformatics and Biology Insights
  • "Role and Regulation of Clp Proteases: A Target against Gram-Positive Bacteria," 2023, Bacteria

Frequent co-authors collaborating with Daniel Paredes-Sabja include:

  • Marjorie Pizarro-Guajardo
  • Enzo Guerrero-Araya
  • César Rodríguez
  • Pablo Castro-Córdova
  • A. Romero

Their work is often published in the following venues:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Anaerobe
  • Nature Communications
  • Microbial Genomics
  • Frontiers in Microbiology

Best Publications

  • Clostridium difficile spore biology: sporulation, germination, and spore structural proteins

    Daniel Paredes-Sabja;Daniel Paredes-Sabja;Aimee Shen;Joseph A. Sorg

  • Germination of spores of Bacillales and Clostridiales species: mechanisms and proteins involved.

    Daniel Paredes-Sabja;Peter Setlow;Mahfuzur R. Sarker

  • Clostridium perfringens Spore Germination: Characterization of Germinants and Their Receptors

    Daniel Paredes-Sabja;J. Antonio Torres;Peter Setlow;Mahfuzur R. Sarker

  • SleC is essential for cortex peptidoglycan hydrolysis during germination of spores of the pathogenic bacterium Clostridium perfringens.

    Daniel Paredes-Sabja;Peter Setlow;Mahfuzur R. Sarker

  • Strategy to inactivate Clostridium perfringens spores in meat products.

    Saeed Akhtar;Daniel Paredes-Sabja;J. Antonio Torres;Mahfuzur R. Sarker

  • Sporulation and Germination in Clostridial Pathogens

    Aimee Shen;Adrianne N. Edwards;Mahfuzur R. Sarker;Daniel Paredes-Sabja

  • Characterization of Clostridium perfringens Spores That Lack SpoVA Proteins and Dipicolinic Acid

    Daniel Paredes-Sabja;Barbara Setlow;Peter Setlow;Mahfuzur R. Sarker

  • Adherence of Clostridium difficile spores to Caco-2 cells in culture

    Daniel Paredes-Sabja;Daniel Paredes-Sabja;Mahfuzur R. Sarker

  • Lauric Acid Is an Inhibitor of Clostridium difficile Growth in Vitro and Reduces Inflammation in a Mouse Infection Model.

    Hsiao-Ting Yang;Jenn-Wei Chen;Jagat Rathod;Yu-Zhen Jiang

  • Clostridium perfringens sporulation and sporulation-associated toxin production

    Jihong Li;Daniel Paredes-Sabja;Mahfuzur R. Sarker;Bruce A. McClane

  • The Clostridium difficile Exosporium Cysteine (CdeC) Rich Protein is Required for Exosporium Morphogenesis and Coat Assembly.

    Jonathan Barra-Carrasco;Valeria Olguín-Araneda;Ángela Plaza-Garrido;Camila Miranda-Cárdenas

  • Combined effects of hydrostatic pressure, temperature, and pH on the inactivation of spores of Clostridium perfringens type A and Clostridium sporogenes in buffer solutions.

    D. Paredes-Sabja;M. Gonzalez;M.R. Sarker;J.A. Torres

  • Clostridium difficile toxins induce VEGF-A and vascular permeability to promote disease pathogenesis

    Jun Huang;Jun Huang;Ciarán P. Kelly;Kyriaki Bakirtzi;Javier A. Villafuerte Gálvez

  • The protease CspB is essential for initiation of cortex hydrolysis and dipicolinic acid (DPA) release during germination of spores of Clostridium perfringens type A food poisoning isolates.

    Daniel Paredes-Sabja;Peter Setlow;Mahfuzur R. Sarker

  • Major genetic discontinuity and novel toxigenic species in Clostridioides difficile taxonomy.

    Daniel R. Knight;Korakrit Imwattana;Brian Kullin;Enzo Guerrero-Araya

  • Characterization of the collagen-like exosporium protein, BclA1, of Clostridium difficile spores.

    Marjorie Pizarro-Guajardo;Valeria Olguín-Araneda;Jonathan Barra-Carrasco;Christian Brito-Silva

  • Entry of spores into intestinal epithelial cells contributes to recurrence of Clostridioides difficile infection.

    Pablo Castro-Córdova;Pablo Castro-Córdova;Paola Mora-Uribe;Rodrigo Reyes-Ramírez;Rodrigo Reyes-Ramírez;Glenda Cofré-Araneda

  • Inhibitory Effects of Nisin Against Clostridium perfringens Food Poisoning and Nonfood-Borne Isolates

    Pathima Udompijitkul;Daniel Paredes-Sabja;Mahfuzur R. Sarker

  • Characterization of the Adherence of Clostridium difficile Spores: The Integrity of the Outermost Layer Affects Adherence Properties of Spores of the Epidemic Strain R20291 to Components of the Intestinal Mucosa.

    Paola Mora-Uribe;Camila Miranda-Cárdenas;Pablo Castro-Córdova;Fernando Gil

  • Protein composition of the outermost exosporium-like layer of Clostridium difficile 630 spores

    Fernando Díaz-González;Mauro Milano;Valeria Olguin-Araneda;Jaime Pizarro-Cerda

  • Germination of spores of Clostridium difficile strains, including isolates from a hospital outbreak of Clostridium difficile-associated disease (CDAD)

    Daniel Paredes-Sabja;Colton Bond;Robert J. Carman;Peter Setlow

  • Clostridium difficile spore-macrophage interactions: spore survival.

    Daniel Paredes-Sabja;Glenda Cofre-Araneda;Christian Brito-Silva;Marjorie Pizarro-Guajardo

  • Inhibitory effects of polyphosphates on Clostridium perfringens growth, sporulation and spore outgrowth

    Saeed Akhtar;Daniel Paredes-Sabja;Mahfuzur R. Sarker

Frequent Co-Authors

Mahfuzur R. Sarker
Mahfuzur R. Sarker Oregon State University
Peter Setlow
Peter Setlow University of Connecticut Health Center
Mark H. Wilcox
Mark H. Wilcox University of Leeds
Nigel P. Minton
Nigel P. Minton University of Nottingham
David W. Eyre
David W. Eyre University of Oxford
Kate E. Dingle
Kate E. Dingle University of Oxford
Xavier Didelot
Xavier Didelot University of Warwick
Thomas V. Riley
Thomas V. Riley Edith Cowan University
Ezio Ricca
Ezio Ricca University of Naples Federico II
Ramon Rosselló-Móra
Ramon Rosselló-Móra Spanish National Research Council

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