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Genetics

D-Index
74
Citations
19288
World Ranking
1966
National Ranking
247

Overview

Xavier Didelot is affiliated with the University of Warwick in the United Kingdom and works primarily in the fields of Biochemistry, Genetics and Molecular Biology, and Medicine. Their research spans several interconnected areas such as Molecular Biology, Infectious Diseases, Genetics, Microbiology, and Food Science.

Their work encompasses a range of topics including:

  • Genomics and Phylogenetic Studies
  • Evolution and Genetic Dynamics
  • Salmonella and Campylobacter epidemiology
  • Antibiotic Resistance in Bacteria
  • Bacteriophages and microbial interactions
  • Bacterial Identification and Susceptibility Testing
  • SARS-CoV-2 and COVID-19 Research

Recent papers authored or co-authored by Xavier Didelot demonstrate a focus on microbial evolution, antimicrobial resistance, and infectious disease dynamics. Selected recent publications include:

  • "Rapid expansion and international spread of M1UK in the post-pandemic UK upsurge of Streptococcus pyogenes," 2024, Nature Communications
  • "Emergence of methicillin resistance predates the clinical use of antibiotics," 2022, Nature
  • "Major genetic discontinuity and novel toxigenic species in Clostridioides difficile taxonomy," 2021, eLife
  • "Inference of person-to-person transmission of COVID-19 reveals hidden super-spreading events during the early outbreak phase," 2020, Nature Communications
  • "Population genomics and antimicrobial resistance in Corynebacterium diphtheriae," 2020, Genome Medicine

Frequent collaboration is evident in their work, with notable co-authors including Paolo Ribeca, Erik Volz, David Helekal, Alice Ledda, and Matt J. Keeling. These collaborations often enhance research across molecular epidemiology and infectious disease modeling.

The venues where Xavier Didelot most frequently publishes highlight their focus on both foundational and applied research in microbial genomics and epidemiology. Key publication venues include:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Microbial Genomics
  • Nature Communications
  • arXiv (Cornell University)
  • Zenodo (CERN European Organization for Nuclear Research)

Best Publications

  • Transforming clinical microbiology with bacterial genome sequencing

    Xavier Didelot;Rory Bowden;Rory Bowden;Rory Bowden;Daniel J. Wilson;Daniel J. Wilson;Tim E. A. Peto

  • ClonalFrameML: efficient inference of recombination in whole bacterial genomes.

    Xavier Didelot;Daniel J. Wilson

  • Inference of Bacterial Microevolution Using Multilocus Sequence Data

    Xavier Didelot;Daniel Falush

  • Diverse Sources of C. difficile Infection Identified on Whole-Genome Sequencing

    D W Eyre;M L Cule;D J Wilson;D Griffiths

  • A comparison of homologous recombination rates in bacteria and archaea.

    Michiel Vos;Xavier Didelot

  • The global distribution and spread of the mobilized colistin resistance gene mcr-1.

    Ruobing Wang;Lucy van Dorp;Liam P. Shaw;Phelim Bradley

  • Within-host evolution of bacterial pathogens

    Xavier Didelot;A. Sarah Walker;Tim E. Peto;Derrick W. Crook;Derrick W. Crook

  • Impact of recombination on bacterial evolution

    Xavier Didelot;Martin C.J. Maiden

  • Genome-wide association study identifies vitamin B5 biosynthesis as a host specificity factor in Campylobacter

    Samuel K. Sheppard;Xavier Didelot;Guillaume Meric;Alicia Torralbo

  • Evolutionary History of the Global Emergence of the Escherichia coli Epidemic Clone ST131

    Nicole Stoesser;Anna E. Sheppard;Louise Pankhurst;Nicola De Maio

  • Effects of control interventions on Clostridium difficile infection in England: an observational study

    Kate E Dingle;Kate E Dingle;Kate E Dingle;Xavier Didelot;T Phuong Quan;T Phuong Quan;T Phuong Quan;David W Eyre;David W Eyre

  • Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease

    Bernadette C. Young;Tanya Golubchik;Elizabeth M. Batty;Rowena Fung

  • Helicobacter pylori genome evolution during human infection

    Lynn Kennemann;Xavier Didelot;Toni Aebischer;Stefanie Kuhn

  • A pilot study of rapid benchtop sequencing of Staphylococcus aureus and Clostridium difficile for outbreak detection and surveillance

    D W Eyre;T Golubchik;N C Gordon;R Bowden

  • Bayesian reconstruction of disease outbreaks by combining epidemiologic and genomic data.

    Thibaut Jombart;Anne Cori;Xavier Didelot;Simon Cauchemez

  • Bayesian inference of ancestral dates on bacterial phylogenetic trees.

    Xavier Didelot;Nicholas J Croucher;Stephen D Bentley;Simon R Harris

  • Genomic Infectious Disease Epidemiology in Partially Sampled and Ongoing Outbreaks

    Xavier Didelot;Christophe Fraser;Christophe Fraser;Jennifer Gardy;Caroline Colijn

  • Maternal high fat diet during pregnancy and lactation alters hepatic expression of insulin like growth factor-2 and key microRNAs in the adult offspring

    Junlong Zhang;Fang Zhang;Xavier Didelot;Kimberley D Bruce

  • Measurably evolving pathogens in the genomic era

    Roman Biek;Roman Biek;Oliver G. Pybus;James O. Lloyd-Smith;James O. Lloyd-Smith;Xavier Didelot

  • A phylogenetic method to perform genome-wide association studies in microbes that accounts for population structure and recombination.

    Caitlin Collins;Xavier Didelot

Frequent Co-Authors

Derrick W. Crook
Derrick W. Crook University of Oxford
Daniel J. Wilson
Daniel J. Wilson University of Oxford
Tim E. A. Peto
Tim E. A. Peto University of Oxford
Daniel Falush
Daniel Falush Chinese Academy of Sciences
Rory Bowden
Rory Bowden Walter and Eliza Hall Institute of Medical Research
David W. Eyre
David W. Eyre University of Oxford
Kate E. Dingle
Kate E. Dingle University of Oxford
Sebastian Suerbaum
Sebastian Suerbaum Ludwig-Maximilians-Universität München
Nicole Stoesser
Nicole Stoesser University of Oxford
Martin C. J. Maiden
Martin C. J. Maiden University of Oxford

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