Samuel K. Sheppard

Overview

Best Publications

• Ribosomal multilocus sequence typing: universal characterization of bacteria from domain to strain.

  Keith A. Jolley;Carly M. Bliss;Julia S. Bennett;Holly B. Bratcher

  714
  Citations

• Campylobacter Genotyping to Determine the Source of Human Infection

  Samuel K. Sheppard;John F. Dallas;Norval J. C. Strachan;Marian MacRae

  500
  Citations

• Advances in molecular ecology: tracking trophic links through predator–prey food‐webs

  S. K. Sheppard;J. D. Harwood

  416
  Citations

• Genome-wide association study identifies vitamin B5 biosynthesis as a host specificity factor in Campylobacter

  Samuel K. Sheppard;Xavier Didelot;Guillaume Meric;Alicia Torralbo

  340
  Citations

• Detection of secondary predation by PCR analyses of the gut contents of invertebrate generalist predators.

  Samuel Keir Sheppard;J. Bell;K. D. Sunderland;J. Fenlon

  297
  Citations

• Convergence of Campylobacter species: implications for bacterial evolution

  Samuel K. Sheppard;Noel D. McCarthy;Daniel Falush;Martin C. J. Maiden

  297
  Citations

• Infiltration by alien predators into invertebrate food webs in Hawaii: a molecular approach

  Samuel Keir Sheppard;M. L. Henneman;J. Memmott;William Oliver Chistian Symondson

  235
  Citations

• Combined analysis of variation in core, accessory and regulatory genome regions provides a super-resolution view into the evolution of bacterial populations

  Alan McNally;Yaara Oren;Darren Kelly;Ben Pascoe

  212
  Citations

• Population genomics of bacterial host adaptation.

  Samuel K. Sheppard;David S. Guttman;J. Ross Fitzgerald

  212
  Citations

• CLIMB (the Cloud Infrastructure for Microbial Bioinformatics): an online resource for the medical microbiology community

  Thomas R. Connor;Nicholas J Loman;Simon Thompson;Andy Smith

  211
  Citations

• Campylobacter genotypes from food animals, environmental sources and clinical disease in Scotland 2005/6.

  Samuel K. Sheppard;John F Dallas;Marion MacRae;Noel D. McCarthy

  182
  Citations

• PIRATE: A fast and scalable pangenomics toolbox for clustering diverged orthologues in bacteria.

  Sion C Bayliss;Harry A Thorpe;Nicola M Coyle;Samuel K Sheppard

  180
  Citations

• Progressive genome-wide introgression in agricultural Campylobacter coli

  Samuel K. Sheppard;Samuel K. Sheppard;Xavier Didelot;Keith A. Jolley;Aaron E. Darling

  178
  Citations

• The evolution of campylobacter jejuni and campylobacter coli

  Samuel K. Sheppard;Martin C.J. Maiden

  178
  Citations

• Campylobacter epidemiology: a descriptive study reviewing 1 million cases in England and Wales between 1989 and 2011

  Gordon L Nichols;Judith F Richardson;Samuel K Sheppard;Samuel K Sheppard;Chris Lane

  174
  Citations

• Ecological Overlap and Horizontal Gene Transfer in Staphylococcus aureus and Staphylococcus epidermidis.

  Guillaume Méric;Maria Miragaia;Mark de Been;Koji Yahara;Koji Yahara

  166
  Citations

• Attribution of Campylobacter Infections in Northeast Scotland to Specific Sources by Use of Multilocus Sequence Typing

  Norval J. C. Strachan;Fraser J. Gormley;Ovidiu Rotariu;Iain D. Ogden

  164
  Citations

• A Gene-By-Gene Approach to Bacterial Population Genomics: Whole Genome MLST of Campylobacter

  Samuel K. Sheppard;Keith A. Jolley;Martin C. J. Maiden

  160
  Citations

• Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis

  Guillaume Méric;Leonardos Mageiros;Leonardos Mageiros;Johan Pensar;Maisem Laabei;Maisem Laabei

  156
  Citations

• Cryptic ecology among host generalist Campylobacter jejuni in domestic animals

  Samuel K. Sheppard;Samuel K. Sheppard;Lu Cheng;Guillaume Méric;Caroline P. A. de Haan

  153
  Citations