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Computer Science

D-Index
58
Citations
16768
World Ranking
3573
National Ranking
159

Overview

Christoph Steinbeck is affiliated with Friedrich Schiller University Jena in Germany. Their research spans multiple fields within the life sciences and computational studies, with a noted focus on biochemistry, genetics, molecular biology, and computer science.

The primary fields of study include:

  • Biochemistry, Genetics and Molecular Biology
  • Computer Science

Within these broad areas, Steinbeck's work delves into several subfields such as:

  • Molecular Biology
  • Computational Theory and Mathematics
  • Materials Chemistry
  • Information Systems and Management
  • Information Systems

The scientist's research covers various main topics, including:

  • Computational Drug Discovery Methods
  • Metabolomics and Mass Spectrometry Studies
  • Machine Learning in Materials Science
  • Scientific Computing and Data Management
  • Research Data Management Practices
  • Biomedical Text Mining and Ontologies
  • Microbial Natural Products and Biosynthesis

Steinbeck has contributed extensively to scientific literature, with notable recent papers being:

  • COCONUT online: Collection of Open Natural Products database, 2021, Journal of Cheminformatics
  • Review on natural products databases: where to find data in 2020, 2020, Journal of Cheminformatics
  • The LOTUS initiative for open knowledge management in natural products research, 2022, eLife
  • DECIMER: towards deep learning for chemical image recognition, 2020, Journal of Cheminformatics
  • A review of optical chemical structure recognition tools, 2020, Journal of Cheminformatics

The venues where Steinbeck frequently publishes work include:

  • Journal of Cheminformatics
  • Zenodo (CERN European Organization for Nuclear Research)
  • bioRxiv (Cold Spring Harbor Laboratory)
  • Research Ideas and Outcomes
  • Research Square (Research Square)

Steinbeck has collaborated regularly with a group of coauthors, among whom are:

  • Achim Zielesny
  • Maria Sorokina
  • Kohulan Rajan
  • Henning Otto Brinkhaus
  • Oliver Koepler

Best Publications

  • ClassyFire: automated chemical classification with a comprehensive, computable taxonomy

    Yannick Djoumbou Feunang;Roman Eisner;Craig Knox;Leonid Chepelev

  • The Chemistry Development Kit (CDK): An open-source Java library for chemo- and bioinformatics

    Christoph Steinbeck;Yongquan Han;Stefan Kuhn;Oliver Horlacher

  • ChEBI in 2016: Improved services and an expanding collection of metabolites.

    Janna Hastings;Gareth Owen;Adriano Dekker;Marcus Ennis

  • MetaboLights—an open-access general-purpose repository for metabolomics studies and associated meta-data

    Kenneth Haug;Reza M. Salek;Pablo Conesa;Janna Hastings

  • The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013

    Janna Hastings;Paula de Matos;Adriano Dekker;Marcus Ennis

  • Recent developments of the chemistry development kit (CDK) - an open-source java library for chemo- and bioinformatics

    Christoph Steinbeck;Christian Hoppe;Stefan Kuhn;Matteo Floris

  • COCONUT online: Collection of Open Natural Products database

    Maria Sorokina;Peter Merseburger;Kohulan Rajan;Mehmet Aziz Yirik

  • The Chemistry Development Kit (CDK) v2.0: atom typing, depiction, molecular formulas, and substructure searching

    Egon L. Willighagen;John W. Mayfield;Jonathan Alvarsson;Arvid Berg

  • The Blue Obelisk—Interoperability in Chemical Informatics

    Rajarshi Guha;Michael T. Howard;Geoffrey R. Hutchison;Peter Murray-Rust

  • Toward interoperable bioscience data

    Susanna-Assunta Sansone;Philippe Rocca-Serra;Dawn Field;Eamonn Maguire

  • The role of reporting standards for metabolite annotation and identification in metabolomic studies.

    Reza M Salek;Reza M Salek;Christoph Steinbeck;Mark R Viant;Royston Goodacre

  • Review on natural products databases: where to find data in 2020

    Maria Sorokina;Christoph Steinbeck

  • The LOTUS initiative for open knowledge management in natural products research

    Unknown

  • Chemical Entities of Biological Interest: an update

    Paula de Matos;Rafael Alcántara;Adriano Dekker;Marcus Ennis

  • Navigating freely-available software tools for metabolomics analysis

    Rachel Spicer;Reza M. Salek;Pablo Moreno;Daniel Cañueto

  • MetaboLights: An Open-Access Database Repository for Metabolomics Data.

    Namrata S. Kale;Kenneth Haug;Pablo Conesa;Kalaivani Jayseelan

  • NMRShiftDB-constructing a free chemical information system with open-source components.

    Christoph Steinbeck;Stefan Krause;Stefan Kuhn

  • Discovering and linking public omics data sets using the Omics Discovery Index

    Yasset Perez-Riverol;Mingze Bai;Mingze Bai;Mingze Bai;Felipe Da Veiga Leprevost;Silvano Squizzato

  • COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access

    Reza M. Salek;Reza M. Salek;Steffen Neumann;Daniel Schober;Jan Hummel

  • KNIME-CDK: Workflow-driven cheminformatics.

    Stephan Beisken;Thorsten Meinl;Bernd Wiswedel;Luis F. de Figueiredo

  • Bioclipse: an open source workbench for chemo- and bioinformatics

    Ola Spjuth;Tobias Helmus;Egon L Willighagen;Stefan Kuhn

Frequent Co-Authors

Janna Hastings
Janna Hastings University College London
Reza M. Salek
Reza M. Salek International Agency For Research On Cancer
Egon Willighagen
Egon Willighagen Maastricht University
Steffen Neumann
Steffen Neumann Leibniz Institute of Plant Biochemistry
Philippe Rocca-Serra
Philippe Rocca-Serra University of Oxford
Susanna-Assunta Sansone
Susanna-Assunta Sansone University of Oxford
Henning Hermjakob
Henning Hermjakob European Bioinformatics Institute
Marta Cascante
Marta Cascante University of Barcelona
Ola Spjuth
Ola Spjuth Uppsala University
Julian L. Griffin
Julian L. Griffin University of Aberdeen

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