World's Best Scientists 2026 revealed!

D-Index & Metrics

Computer Science

D-Index
47
Citations
10081
World Ranking
6434
National Ranking
255

Research.com Recognitions

  • 2012 - Fellow of the Royal Society of Canada Academy of Science
  • 2010 - ACM Fellow For contributions in complexity theory and leadership in advancing women in computing.

Overview

Anne Condon is affiliated with the University of British Columbia in Canada. Their research spans multiple areas within biochemistry, genetics, molecular biology, and materials science, with a focus on molecular biology, structural biology, surfaces, coatings and films, materials chemistry, and electrical and electronic engineering.

Their work covers several prominent topics that include:

  • Advanced Electron Microscopy Techniques and Applications
  • Electron and X-Ray Spectroscopy Techniques
  • Machine Learning in Materials Science
  • Gene Regulatory Network Analysis
  • DNA and Nucleic Acid Chemistry
  • Advanced Biosensing and Bioanalysis Techniques
  • Magnetic Properties and Applications

Condon has contributed to at least five recent papers published between 2020 and 2025. These include:

  • "AlignOT: An Optimal Transport Based Algorithm for Fast 3D Alignment With Applications to Cryogenic Electron Microscopy Density Maps" (2023) published in IEEE/ACM Transactions on Computational Biology and Bioinformatics
  • "CellUntangler: separating distinct biological signals in single-cell data with deep generative models" (2025) published in bioRxiv (Cold Spring Harbor Laboratory)
  • "Predicting DNA kinetics with a truncated continuous-time Markov chain method" (2023) published in Computational Biology and Chemistry
  • "Alignment of Partially Overlapping Cryo-EM Maps Using Unbalanced Gromov-Wasserstein Divergence" (2025) published in PRX Life
  • "Composable Computation in Leaderless, Discrete Chemical Reaction Networks" (2020) published by Leibniz-Zentrum für Informatik (Schloss Dagstuhl)

Their frequent co-authors include:

  • Khanh Dao Duc
  • Chenwei Zhang
  • Aryan Tajmir Riahi
  • Kristin Sheridan
  • Joseph Berleant

Condon's research has been published in several venues multiple times, such as:

  • arXiv (Cornell University)
  • Leibniz-Zentrum für Informatik (Schloss Dagstuhl)
  • bioRxiv (Cold Spring Harbor Laboratory)
  • Discrete Applied Mathematics
  • IEEE/ACM Transactions on Computational Biology and Bioinformatics

Awards earned by Condon include:

  • Fellow of the Royal Society of Canada (2012) for contributions recognized by the Academy of Science
  • ACM Fellow (2010) awarded for contributions in complexity theory and leadership in advancing women in computing

Best Publications

  • DNA computing on surfaces.

    Qinghua Liu;Liman Wang;Anthony G. Frutos;Anne E. Condon;Anne E. Condon

  • The complexity of stochastic games

    Anne Condon

  • Algorithms for graph partitioning on the planted partition model

    Anne Condon;Richard M. Karp

  • Interpretable dimensionality reduction of single cell transcriptome data with deep generative models.

    Jiarui Ding;Anne Condon;Sohrab P. Shah

  • Demonstration of a word design strategy for DNA computing on surfaces.

    Anthony G. Frutos;Qinghua Liu;Andrew J. Thiel;Anne Marie W. Sanner

  • On Combinatorial DNA Word Design

    Amit Marathe;Anne E. Condon;Robert M. Corn

  • RNA STRAND: The RNA Secondary Structure and Statistical Analysis Database

    Mirela Andronescu;Vera Bereg;Holger H Hoos;Anne Condon

  • HotKnots: Heuristic prediction of RNA secondary structures including pseudoknots

    Jihong Ren;Baharak Rastegari;Anne Condon;Holger H. Hoos

  • On the undecidability of probabilistic planning and infinite-horizon partially observable Markov decision problems

    Omid Madani;Steve Hanks;Anne Condon

  • On the undecidability of probabilistic planning and related stochastic optimization problems

    Omid Madani;Steve Hanks;Anne Condon

  • Efficient parameter estimation for RNA secondary structure prediction

    Mirela Andronescu;Anne Condon;Holger H. Hoos;David H. Mathews

  • On Algorithms for Simple Stochastic Games.

    Anne Condon

  • A new algorithm for RNA secondary structure design.

    Mirela Andronescu;Anthony P. Fejes;Frank Hutter;Holger H. Hoos

  • Feature-based classifiers for somatic mutation detection in tumour–normal paired sequencing data

    Jiarui Ding;Ali Bashashati;Andrew Roth;Arusha Oloumi

  • RNAsoft: a suite of RNA secondary structure prediction and design software tools

    Mirela Andronescu;Rosalía Aguirre-Hernández;Anne Condon;Holger H. Hoos

  • Computational approaches for RNA energy parameter estimation.

    Mirela Andronescu;Anne Condon;Holger H. Hoos;David H. Mathews

  • DNA Models and Algorithms for NP-Complete Problems

    Eric Bach;Anne Condon;Elton Glaser;Celena Tanguay

  • Strand design for biomolecular computation

    Arwen Brenneman;Anne Condon

  • On the complexity of space bounded interactive proofs

    A. Condon;R.J. Lipton

  • Improved free energy parameters for RNA pseudoknotted secondary structure prediction.

    Mirela S. Andronescu;Cristina Pop;Anne E. Condon

  • On the Complexity of Space Bounded Interactive Proofs (Extended Abstract)

    Anne Condon;Richard J. Lipton

  • On games of incomplete information

    Jin-yi Cai;Anne Condon;Richard J. Lipton

Frequent Co-Authors

Holger H. Hoos
Holger H. Hoos RWTH Aachen University
Lloyd M. Smith
Lloyd M. Smith University of Wisconsin–Madison
Alan J. Hu
Alan J. Hu University of British Columbia
Richard J. Lipton
Richard J. Lipton Georgia Institute of Technology
Sohrab P. Shah
Sohrab P. Shah Memorial Sloan Kettering Cancer Center
Kevin Leyton-Brown
Kevin Leyton-Brown University of British Columbia
Mark D. Hill
Mark D. Hill University of Wisconsin–Madison
Richard E. Ladner
Richard E. Ladner University of Washington
Daniel J. Sorin
Daniel J. Sorin Duke University
Max G. Lagally
Max G. Lagally University of Wisconsin–Madison

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