The scientist’s investigation covers issues in RNA, Computational biology, Genetics, Non-coding RNA and Folding. His study in RNA is interdisciplinary in nature, drawing from both Base pair, Protein secondary structure and Sequence. Ivo L. Hofacker combines subjects such as Nucleic acid structure, Human genome, Sequence alignment, Phylogenetic tree and Conserved sequence with his study of Computational biology.
His Sequence alignment research includes elements of Software and Bioinformatics. In general Non-coding RNA study, his work on Rfam often relates to the realm of Structure based, thereby connecting several areas of interest. The various areas that Ivo L. Hofacker examines in his Dynamic programming study include Basis, Energy and Partition function.
Ivo L. Hofacker mainly investigates RNA, Computational biology, Genetics, Genome and Folding. His research in RNA intersects with topics in Base pair and Protein secondary structure. The Protein secondary structure study combines topics in areas such as Basis and Nucleic acid.
Comparative genomics and Complementarity is closely connected to Non-coding RNA in his research, which is encompassed under the umbrella topic of Computational biology. The study incorporates disciplines such as Evolutionary biology, Phylogenetics and Coding region in addition to Genome. His Dynamic programming research focuses on Energy and how it connects with Statistical physics.
His main research concerns RNA, Computational biology, Genome, Gene and Non-coding RNA. His studies in RNA integrate themes in fields like Base pair, Transcription and Synthetic biology. His Computational biology research includes themes of Protein secondary structure, RNA Sequence, Sequence, In silico and Riboswitch.
Genome is the subject of his research, which falls under Genetics. In his research, Pipeline and Bioinformatics is intimately related to Complementarity, which falls under the overarching field of Non-coding RNA. Ivo L. Hofacker works mostly in the field of Genomics, limiting it down to concerns involving Long non-coding RNA and, occasionally, Regulation of gene expression.
His scientific interests lie mostly in RNA, Computational biology, Transcriptome, Genome and Regulation of gene expression. RNA is a subfield of Genetics that Ivo L. Hofacker tackles. His Genetics study integrates concerns from other disciplines, such as Web server and Model building.
His Computational biology research integrates issues from Non-coding RNA, microRNA, Base pair, Sequence and Base sequence. His Non-coding RNA study combines topics in areas such as Complementarity and Bioinformatics. His research in Genome focuses on subjects like Nucleic acid secondary structure, which are connected to Database, Genomics, Intron and Molecular Sequence Annotation.
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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Ewan Birney;John A. Stamatoyannopoulos;Anindya Dutta;Roderic Guigó.
ViennaRNA Package 2.0
Ronny Lorenz;Stephan H. F. Bernhart;Christian Höner zu Siederdissen;Hakim Tafer.
Algorithms for Molecular Biology (2011)
Fast folding and comparison of RNA secondary structures
I. L. Hofacker;W. Fontana;P. F. Stadler;P. F. Stadler;L. S. Bonhoeffer.
Monatshefte Fur Chemie (1994)
RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription
Philipp Kapranov;Jill Cheng;Sujit Dike;David A. Nix.
Vienna RNA secondary structure server
Ivo L. Hofacker.
Nucleic Acids Research (2003)
The Vienna RNA Websuite
Andreas R. Gruber;Ronny Lorenz;Stephan H. F. Bernhart;Richard Neuböck.
Nucleic Acids Research (2008)
From Sequences to Shapes and Back: A Case Study in RNA Secondary Structures
Peter Schuster;Walter Fontana;Peter F. Stadler;Ivo L. Hofacker.
Proceedings of The Royal Society B: Biological Sciences (1994)
Fast and reliable prediction of noncoding RNAs
Stefan Washietl;Ivo L. Hofacker;Peter F. Stadler.
Proceedings of the National Academy of Sciences of the United States of America (2005)
Fast Folding and Comparison of RNA Secondary Structures
Ivo L. Hofacker;Walter Fontana;Peter F. Stadler;L. Sebastian Bonhoeffer.
Research Papers in Economics (1993)
Secondary structure prediction for aligned RNA sequences.
Ivo L. Hofacker;Martin Fekete;Peter F. Stadler;Peter F. Stadler.
Journal of Molecular Biology (2002)
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