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Alexander Vologodskii

Alexander Vologodskii

D-Index & Metrics

Molecular Biology

D-Index
56
Citations
10134
World Ranking
2212
National Ranking
1097

Overview

Alexander Vologodskii is a researcher affiliated with New York University in the United States. Their work primarily intersects the fields of Biochemistry, Genetics and Molecular Biology, with additional contributions in Medicine. Specific subfields of their study include Molecular Biology, Radiology, Nuclear Medicine and Imaging, Immunology, and Oncology.

The scientist's research addresses several key topics:

  • Cancer therapeutics and mechanisms
  • Monoclonal and Polyclonal Antibodies Research
  • Immunotherapy and Immune Responses
  • DNA Repair Mechanisms
  • DNA and Nucleic Acid Chemistry
  • PARP inhibition in cancer therapy

Recent publications by Alexander Vologodskii include the following:

  • "Mechanism of topology simplification by type II DNA topoisomerases" (2020), published in UNC Libraries
  • "Reverse Gyrase and Stability of Hyperthermophilic DNA" (2025), published in SSRN Electronic Journal

Collaboration is a notable aspect of their work, with frequent coauthors including W. Zhang, V. V. Rybenkov, A. A. Podtelezhnikov, Darshini Subramanian, and J. D. Griffith. These partnerships contribute to cross-disciplinary insights and broaden the impact of their research.

Alexander Vologodskii's publications have appeared primarily in venues such as UNC Libraries and SSRN Electronic Journal. Their body of work combines experimental and theoretical approaches to understand molecular mechanisms involved in DNA topology and stability, with implications for cancer biology and therapeutic strategies.

Best Publications

  • Probability of DNA knotting and the effective diameter of the DNA double helix

    Valentin V. Rybenkov;Nicholas R. Cozzarelli;Alexander V. Vologodskii

  • Conformational and thermodynamic properties of supercoiled DNA.

    A V Vologodskii;N R Cozzarelli

  • Conformational and Thermodynamic Properties of Supercoiled DNA

    Alexander V. Vologodskii;Stephen D. Levene;Konstantin V. Klenin;Maxim Frank-Kamenetskii

  • Simplification of DNA topology below equilibrium values by type II topoisomerases.

    Valentin V. Rybenkov;Christian Ullsperger;Christian Ullsperger;Alexander V. Vologodskii;Alexander V. Vologodskii;Nicholas R. Cozzarelli;Nicholas R. Cozzarelli

  • Cyclization of short DNA fragments and bending fluctuations of the double helix

    Quan Du;Chaim Smith;Nahum Shiffeldrim;Maria Vologodskaia

  • Statistical mechanics and topology of polymer chains

    M. D. Frank-Kamenetskii;A. V. Lukashin;A. V. Vologodskii

  • Positive Torsional Strain Causes the Formation of a Four-way Junction at Replication Forks

    Lisa Postow;Chris Ullsperger;Rebecca W. Keller;Carlos Bustamante

  • Sequence dependence of DNA bending rigidity

    Stephanie Geggier;Alexander Vologodskii

  • The kinetics of oligonucleotide replacements.

    Luis P Reynaldo;Alexander V Vologodskii;Bruce P Neri;Victor I Lyamichev

  • Chirality sensing by Escherichia coli topoisomerase IV and the mechanism of type II topoisomerases

    Michael D. Stone;Zev Bryant;Nancy J. Crisona;Steven B. Smith

  • The Flexibility of DNA Double Crossover Molecules

    Phiset Sa-Ardyen;Alexander V. Vologodskii;Nadrian C. Seeman

  • Effect of supercoiling on the juxtaposition and relative orientation of DNA sites.

    A. Vologodskii;N.R. Cozzarelli

  • Mechanism of topology simplification by type II DNA topoisomerases

    Alexander V. Vologodskii;Wentao Zhang;Valentin V. Rybenkov;Alexei A. Podtelezhnikov

  • Temperature dependence of DNA persistence length

    Stephanie Geggier;Alexander Kotlyar;Alexander Vologodskii

  • A Combined Wormlike-Chain and Bead Model for Dynamic Simulations of Long Linear DNA

    Hongmei Jian;Alexander V. Vologodskii;Tamar Schlick

  • Torsional and bending rigidity of the double helix from data on small DNA rings.

    M. D. Frank-Kamenetskii;A. V. Lukashin;V. V. Anshelevich;A. V. Vologodskii

  • The Effect of Ionic Conditions on DNA Helical Repeat, Effective Diameter and Free Energy of Supercoiling

    Valentin V. Rybenkov;Alexander V. Vologodskii;Nicholas R. Cozzarelli

  • COMPUTER SIMULATION OF DNA SUPERCOILING

    Konstantin V. Klenin;Alexander V. Vologodskii;Vadim V. Anshelevich;Alexander M. Dykhne

  • Statistical mechanics of supercoils and the torsional stiffness of the DNA double helix

    A. V. Vologodskii;V. V. Anshelevich;A. V. Lukashin;M. D. Frank-Kamenetskii

  • Kinking the double helix by bending deformation

    Quan Du;Alexander Kotlyar;Alexander Vologodskii

Frequent Co-Authors

Nicholas R. Cozzarelli
Nicholas R. Cozzarelli University of California, Berkeley
Nadrian C. Seeman
Nadrian C. Seeman New York University
Sergei M. Mirkin
Sergei M. Mirkin Tufts University
Tamar Schlick
Tamar Schlick New York University
Vsevolod Katritch
Vsevolod Katritch University of Southern California
Jörg Langowski
Jörg Langowski German Cancer Research Center
Carlos Bustamante
Carlos Bustamante Stanford University
Andrzej Stasiak
Andrzej Stasiak University of Lausanne
Chengde Mao
Chengde Mao Purdue University West Lafayette

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