2026 Jonathan P. K. Doye: Materials Science Researcher – H-Index, Publications & Awards

D-Index & Metrics

Discipline name	D-Index	World Ranking	Current World Ranking	National Ranking	Current National Ranking	Publications	Citations
Materials Science	70	4456	4312	179	168	169	16828
Chemistry	71	5560	5051	321	291	170	17719

Discipline name

D-Index

World Ranking

Current World Ranking

National Ranking

Current National Ranking

Publications

Citations

Materials Science

4456

4312

179

168

169

16828

Chemistry

5560

5051

321

291

170

17719

Materials Science

D-Index

Citations

16828

World Ranking

4456

National Ranking

179

Chemistry

D-Index

Citations

17719

World Ranking

5560

National Ranking

321

Research.com Recognitions

2000 - Edward Harrison Memorial Prize, Royal Society of Chemistry (UK)

Overview

Jonathan P. K. Doye is affiliated with the University of Oxford in the United Kingdom. Their primary research field lies within Biochemistry, Genetics and Molecular Biology, with a significant focus on Molecular Biology. Additional subfields of study include Ecology, Materials Chemistry, Electrical and Electronic Engineering, and Biomaterials.

The researcher's work covers a range of main topics such as Advanced biosensing and bioanalysis techniques, RNA Interference and Gene Delivery, Bacteriophages and microbial interactions, DNA and Nucleic Acid Chemistry, Supramolecular Self-Assembly in Materials, RNA and protein synthesis mechanisms, and Advanced Memory and Neural Computing.

Among their recent published papers are:

Symmetry and simplicity spontaneously emerge from the algorithmic nature of evolution (2022) in Proceedings of the National Academy of Sciences
Designer protein assemblies with tunable phase diagrams in living cells (2020) in Nature Chemical Biology
How to design an icosahedral quasicrystal through directional bonding (2021) in Nature
Self-Limiting Polymerization of DNA Origami Subunits with Strain Accumulation (2020) in ACS Nano
The oxDNA Coarse-Grained Model as a Tool to Simulate DNA Origami (2023) in Methods in molecular biology

Jonathan P. K. Doye has frequently published in the following venues:

bioRxiv (Cold Spring Harbor Laboratory)
arXiv (Cornell University)
Proceedings of the National Academy of Sciences
Zenodo (CERN European Organization for Nuclear Research)
Oxford University Research Archive (ORA) (University of Oxford)

The scientist has collaborated extensively with several researchers, including Ard A. Louis, Thomas E. Ouldridge, Petr Šulc, Chak Kui Wong, and Lorenzo Rovigatti.

In recognition of their work, Jonathan P. K. Doye received the Edward Harrison Memorial Prize from the Royal Society of Chemistry (UK) in 2000.

Best Publications

Global Optimization by Basin-Hopping and the Lowest Energy Structures of Lennard-Jones Clusters Containing up to 110 Atoms

David J. Wales;Jonathan P. K. Doye

3086
Citations
On the biophysics and kinetics of toehold-mediated DNA strand displacement

Niranjan Srinivas;Thomas E. Ouldridge;Petr Šulc;Joseph M. Schaeffer

587
Citations
Global minima for transition metal clusters described by Sutton–Chen potentials

Jonathan P. K. Doye;David J. Wales

512
Citations
The effect of the range of the potential on the structures of clusters

Jonathan P. K. Doye;David J. Wales;R. Stephen Berry

488
Citations
Structural, mechanical, and thermodynamic properties of a coarse-grained DNA model

Thomas E. Ouldridge;Ard A. Louis;Jonathan P. K. Doye

411
Citations
Introducing improved structural properties and salt dependence into a coarse-grained model of DNA

Benedict E. K. Snodin;Ferdinando Randisi;Majid Mosayebi;Petr Šulc

390
Citations
Sequence-dependent thermodynamics of a coarse-grained DNA model

Petr Šulc;Flavio Romano;Thomas E. Ouldridge;Lorenzo Rovigatti

369
Citations
THE DOUBLE-FUNNEL ENERGY LANDSCAPE OF THE 38-ATOM LENNARD-JONES CLUSTER

Jonathan P. K. Doye;Mark A. Miller;David J. Wales

365
Citations
Energy landscapes: from clusters to biomolecules

David J. Wales;Jonathan P. K. Doye;Mark A. Miller;Paul N. Mortenson

356
Citations
Structural consequences of the range of the interatomic potential A menagerie of clusters

Jonathan P. K. Doye;David J. Wales

314
Citations
Evolution of the Potential Energy Surface with Size for Lennard-Jones Clusters

Jonathan P. K. Doye;Mark A. Miller;David J. Wales

273
Citations
Network Topology of a Potential Energy Landscape: A Static Scale-Free Network

Jonathan P. K. Doye

268
Citations
Thermodynamics and the Global Optimization of Lennard-Jones clusters

Jonathan P. K. Doye;David J. Wales;Mark A. Miller

241
Citations
Tetrahedral global minimum for the 98-atom Lennard-Jones cluster.

Robert H. Leary;Jonathan P. K. Doye

235
Citations
Saddle Points and Dynamics of Lennard-Jones Clusters, Solids and Supercooled Liquids

Jonathan P. K. Doye;David J. Wales

234
Citations
Coarse-graining DNA for simulations of DNA nanotechnology

Jonathan P. K. Doye;Thomas E. Ouldridge;Ard A. Louis;Flavio Romano

232
Citations
DNA Nanotweezers Studied with a Coarse-Grained Model of DNA

Thomas E. Ouldridge;Ard A. Louis;Jonathan P. K. Doye

231
Citations
DNA hybridization kinetics: zippering, internal displacement and sequence dependence

Thomas E. Ouldridge;Petr Šulc;Flavio Romano;Jonathan P. K. Doye

229
Citations
Reversible self-assembly of patchy particles into monodisperse icosahedral clusters

Alex W. Wilber;Jonathan P. K. Doye;Ard A. Louis;Eva G. Noya

213
Citations
Controlling crystallization and its absence: proteins, colloids and patchy models

Jonathan P. K. Doye;Ard A. Louis;I-Chun Lin;Lucy R. Allen

212
Citations
Calculation of thermodynamic properties of small Lennard‐Jones clusters incorporating anharmonicity

Jonathan P. K. Doye;David J. Wales

203
Citations