Philippe Derreumaux

Overview

Best Publications

• PEP-FOLD3: faster de novo structure prediction for linear peptides in solution and in complex.

  Alexis Lamiable;Pierre Thévenet;Julien Rey;Marek Vavrusa

  988
  Citations

• PEP-FOLD: an updated de novo structure prediction server for both linear and disulfide bonded cyclic peptides

  Pierre Thévenet;Yimin Shen;Julien Maupetit;Frédéric Guyon

  708
  Citations

• Improved PEP-FOLD Approach for Peptide and Miniprotein Structure Prediction.

  Yimin Shen;Yimin Shen;Julien Maupetit;Julien Maupetit;Philippe Derreumaux;Philippe Derreumaux;Philippe Derreumaux;Pierre Tufféry;Pierre Tufféry

  670
  Citations

• Amyloid β Protein and Alzheimer’s Disease: When Computer Simulations Complement Experimental Studies

  Jessica Nasica-Labouze;Phuong H. Nguyen;Fabio Sterpone;Olivia Berthoumieu

  641
  Citations

• Amyloid oligomers: A joint experimental/computational perspective on Alzheimer's disease, Parkinson's disease, type II diabetes, and amyotrophic lateral sclerosis

  Phuong H. Nguyen;Ayyalusamy Ramamoorthy;Bikash R. Sahoo;Jie Zheng

  621
  Citations

• PEP-FOLD: an online resource for de novo peptide structure prediction

  Julien Maupetit;Philippe Derreumaux;Pierre Tuffery

  485
  Citations

• Inhibition of protein aggregation and amyloid formation by small molecules.

  Andrew J Doig;Philippe Derreumaux;Philippe Derreumaux

  327
  Citations

• A fast method for large-scale de novo peptide and miniprotein structure prediction.

  Julien Maupetit;Philippe Derreumaux;Pierre Tufféry

  258
  Citations

• A coarse‐grained protein force field for folding and structure prediction

  Julien Maupetit;P. Tuffery;Philippe Derreumaux

  251
  Citations

• Molecular mechanism of the inhibition of EGCG on the Alzheimer Aβ(1-42) dimer.

  Tong Zhang;Jian Zhang;Philippe Derreumaux;Philippe Derreumaux;Yuguang Mu

  221
  Citations

• Why Is Research on Amyloid-β Failing to Give New Drugs for Alzheimer’s Disease?

  Andrew J. Doig;Maria P. del Castillo-Frias;Olivia Berthoumieu;Olivia Berthoumieu;Bogdan Tarus

  208
  Citations

• Carbon nanotube inhibits the formation of β-sheet-rich oligomers of the Alzheimer's amyloid-β(16-22) peptide.

  Huiyu Li;Yin Luo;Philippe Derreumaux;Guanghong Wei

  197
  Citations

• Effects of all-atom force fields on amyloid oligomerization: replica exchange molecular dynamics simulations of the Aβ16–22 dimer and trimer

  Phuong H. Nguyen;Phuong H. Nguyen;Mai Suan Li;Philippe Derreumaux;Philippe Derreumaux

  191
  Citations

• The OPEP protein model: from single molecules, amyloid formation, crowding and hydrodynamics to DNA/RNA systems.

  Fabio Sterpone;Simone Melchionna;Pierre Tuffery;Samuela Pasquali

  171
  Citations

• Understanding amyloid fibril nucleation and aβ oligomer/drug interactions from computer simulations.

  Phuong Nguyen;Philippe Derreumaux;Philippe Derreumaux

  167
  Citations

• Pathway Complexity of Alzheimer's β-Amyloid Aβ16-22 Peptide Assembly

  Sébastien Santini;Guanghong Wei;Normand Mousseau;Philippe Derreumaux

  160
  Citations

• In Silico Assembly of Alzheimer's Aβ16-22 Peptide into β-Sheets

  Sébastien Santini;Normand Mousseau;Philippe Derreumaux

  158
  Citations

• HiRE-RNA: a high resolution coarse-grained energy model for RNA.

  Samuela Pasquali;Philippe Derreumaux

  152
  Citations

• High-Resolution Structures of the Amyloid-β 1-42 Dimers from the Comparison of Four Atomistic Force Fields.

  Viet Hoang Man;Phuong H. Nguyen;Philippe Derreumaux

  152
  Citations

• Role of the Region 23-28 in Aβ Fibril Formation: Insights from Simulations of the Monomers and Dimers of Alzheimers Peptides Aβ40 and Aβ42

  Adrien Melquiond;Xiao Dong;Normand Mousseau;Philippe Derreumaux

  140
  Citations

• From polypeptide sequences to structures using Monte Carlo simulations and an optimized potential

  Philippe Derreumaux

  137
  Citations