World's Best Scientists 2026 revealed!

D-Index & Metrics

Computer Science

D-Index
39
Citations
24453
World Ranking
9460
National Ranking
4002

Overview

David J. States is affiliated with the University of Michigan-Ann Arbor in the United States. Their academic profile is focused on their institutional connection without further details on specific research contributions or topics.

No recent papers, frequent co-authors, publication venues, book publications, fields of study, subfields, or main topics of work are listed for David J. States. Additionally, there are no awards recorded for this scholar.

Best Publications

  • Identification of protein coding regions by database similarity search.

    Warren Gish;David J. States;David J. States

  • Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database.

    Gilbert S. Omenn;David J. States;Marcin Adamski;Thomas W. Blackwell

  • PRIDE: The proteomics identifications database

    Lennart Martens;Henning Hermjakob;Philip Jones;Marcin Adamski

  • SAGA: a subgraph matching tool for biological graphs

    Yuanyuan Tian;Richard C. Mceachin;Carlos Santos;David J. States

  • Challenges in deriving high-confidence protein identifications from data gathered by a HUPO plasma proteome collaborative study.

    David J States;Gilbert S Omenn;Thomas W Blackwell;Damian Fermin

  • GLay: community structure analysis of biological networks

    Gang Su;Allan Kuchinsky;John H. Morris;David J. States

  • Systematic comparison of the human saliva and plasma proteomes

    Weihong Yan;Rolf Apweiler;Brian M Balgley;Pinmanee Boontheung

  • Information enhancement methods for large scale sequence analysis

    Jean-Michel Claverie;David J. States

  • Blind men and elephants: What do citation summaries tell us about a research article?

    Aaron Elkiss;Siwei Shen;Anthony Fader;Güneş Erkan

  • Blind men and elephants: What do citation summaries tell us about a research article?

    Unknown

  • Computational Proteomics Analysis System (CPAS): an extensible, open-source analytic system for evaluating and publishing proteomic data and high throughput biological experiments.

    Adam Rauch;Matthew Bellew;Jimmy Eng;Matthew Fitzgibbon

  • Integrating and annotating the interactome using the MiMI plugin for cytoscape

    Jing Gao;Alex S. Ade;V. Glenn Tarcea;Terry E. Weymouth

  • Human Proteinpedia enables sharing of human protein data.

    Suresh Mathivanan;Suresh Mathivanan;Mukhtar Ahmed;Natalie G Ahn;Hainard Alexandre

  • Improved Sensitivity of Nucleic Acid Database Searches Using Application-Specific Scoring Matrices

    David J. States;Warren Gish;Stephen F. Altschul

  • Michigan Molecular Interactions (MiMI): putting the jigsaw puzzle together

    Magesh Jayapandian;Adriane Chapman;V. Glenn Tarcea;Cong Yu

  • SciMiner: Web-based literature mining tool for target identification and functional enrichment analysis

    Junguk Hur;Adam D. Schuyler;David J. States;Eva L. Feldman

  • Combined use of sequence similarity and codon bias for coding region identification

    David J. States;Warren Gish

  • Novel gene and gene model detection using a whole genome open reading frame analysis in proteomics

    Damian Fermin;Baxter B Allen;Thomas W Blackwell;Rajasree Menon

  • CLO: The cell line ontology

    Sirarat Sarntivijai;Sirarat Sarntivijai;Yu Lin;Zuoshuang Xiang;Terrence F. Meehan

  • Michigan molecular interactions r2: from interacting proteins to pathways

    V. Glenn Tarcea;Terry E. Weymouth;Alexander S. Ade;Aaron V. Bookvich

  • A functional annotation of subproteomes in human plasma

    Peipei Ping;Thomas M. Vondriska;Chad J. Creighton;T. K.B. Gandhi

Frequent Co-Authors

Alfred O. Hero
Alfred O. Hero University of Michigan–Ann Arbor
James Douglas Engel
James Douglas Engel University of Michigan–Ann Arbor
Gilbert S. Omenn
Gilbert S. Omenn University of Michigan–Ann Arbor
Brian D. Athey
Brian D. Athey University of Michigan–Ann Arbor
Hosagrahar V. Jagadish
Hosagrahar V. Jagadish University of Michigan–Ann Arbor
Pankaj K. Agarwal
Pankaj K. Agarwal Duke University
Lawrence Hunter
Lawrence Hunter University of Colorado Denver
Jimmy K. Eng
Jimmy K. Eng University of Washington
Rolf Apweiler
Rolf Apweiler European Bioinformatics Institute

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