Attila Gursoy

Research.com Recognitions

• The Science Academy Society of Turkey - Bilim Akademisi Bioinformatics
• The Science Academy Society of Turkey - Bilim Akademisi Bioinformatics

Overview

Best Publications

• NAMD2: Greater Scalability for Parallel Molecular Dynamics

  Laxmikant Kalé;Robert Skeel;Milind Bhandarkar;Robert Brunner

  3048
  Citations

• Principles of Protein−Protein Interactions: What are the Preferred Ways For Proteins To Interact?

  Ozlem Keskin;Attila Gursoy;Buyong Ma;Ruth Nussinov

  848
  Citations

• NAMD: a Parallel, Object-Oriented Molecular Dynamics Program

  Mark T. Nelson;William Humphrey;Attila Gursoy;Andrew Dalke

  796
  Citations

• Predicting Protein-Protein Interactions from the Molecular to the Proteome Level

  Ozlem Keskin;Nurcan Tuncbag;Attila Gursoy

  399
  Citations

• Identification of computational hot spots in protein interfaces

  Nurcan Tuncbag;Attila Gursoy;Ozlem Keskin

  357
  Citations

• Transient protein-protein interactions

  Saliha Ece Acuner Ozbabacan;Hatice Billur Engin;Attila Gursoy;Ozlem Keskin

  345
  Citations

• Predicting protein-protein interactions on a proteome scale by matching evolutionary and structural similarities at interfaces using PRISM

  Nurcan Tuncbag;Attila Gursoy;Ruth Nussinov;Ruth Nussinov;Ozlem Keskin

  316
  Citations

• Human Cancer Protein-Protein Interaction Network: A Structural Perspective

  Gozde Kar;Attila Gursoy;Ozlem Keskin

  288
  Citations

• PRISM: protein interactions by structural matching.

  Utkan Ogmen;Ozlem Keskin;A. Selim Aytuna;Ruth Nussinov

  260
  Citations

• Prediction of protein–protein interactions by combining structure and sequence conservation in protein interfaces

  A. Selim Aytuna;Attila Gursoy;Ozlem Keskin

  248
  Citations

• HotPoint: hot spot prediction server for protein interfaces

  Nurcan Tuncbag;Ozlem Keskin;Attila Gursoy

  243
  Citations

• PRISM: a web server and repository for prediction of protein–protein interactions and modeling their 3D complexes

  Alper Baspinar;Engin Cukuroglu;Ruth Nussinov;Ozlem Keskin

  218
  Citations

• PATIKA: an integrated visual environment for collaborative construction and analysis of cellular pathways.

  Emek Demir;Ozgun Babur;Ugur Dogrusöz;Attila Gürsoy

  214
  Citations

• A survey of available tools and web servers for analysis of protein–protein interactions and interfaces

  Nurcan Tuncbag;Gozde Kar;Ozlem Keskin;Attila Gursoy

  205
  Citations

• Hot spots in protein-protein interfaces: towards drug discovery.

  Engin Cukuroglu;H. Billur Engin;Attila Gursoy;Ozlem Keskin

  192
  Citations

• Topological properties of protein interaction networks from a structural perspective

  Attila Gursoy;Ozlem Keskin;Ruth Nussinov;Ruth Nussinov

  182
  Citations

• HotSprint: database of computational hot spots in protein interfaces

  Emre Guney;Nurcan Tuncbag;Ozlem Keskin;Attila Gursoy

  142
  Citations

• Architectures and functional coverage of protein-protein interfaces.

  Nurcan Tuncbag;Attila Gursoy;Emre Guney;Ruth Nussinov;Ruth Nussinov

  134
  Citations

• HotRegion: a database of predicted hot spot clusters

  Engin Cukuroglu;Attila Gursoy;Ozlem Keskin

  114
  Citations

• PRISM: Protein-protein Interaction Prediction by Structural Matching

  Ozlem Keskin;Ruth Nussinov;Ruth Nussinov;Attila Gursoy

  109
  Citations

• The structural pathway of interleukin 1 (IL-1) initiated signaling reveals mechanisms of oncogenic mutations and SNPs in inflammation and cancer.

  Saliha Ece Acuner Ozbabacan;Attila Gursoy;Ruth Nussinov;Ozlem Keskin

  101
  Citations