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D-Index & Metrics

Microbiology

D-Index
42
Citations
6299
World Ranking
5371
National Ranking
2035

Overview

Yury Khudyakov is affiliated with the Centers for Disease Control and Prevention in the United States and has a significant research output primarily in the fields of Medicine and Biochemistry, Genetics and Molecular Biology. Their work is especially focused on epidemiology and hepatology, with additional contributions to molecular biology, virology, and infectious diseases.

The scientist's notable research topics include:

  • Hepatitis C virus research
  • Hepatitis B Virus Studies
  • Liver Disease Diagnosis and Treatment
  • HIV Research and Treatment
  • Hepatitis Viruses Studies and Epidemiology
  • HIV, Drug Use, Sexual Risk
  • Evolution and Genetic Dynamics

Yury Khudyakov has published multiple papers on viral outbreaks, drug overdose mapping, and phylogenetic analyses of viral transmission. Some of their recent publications include:

  • "Widespread Hepatitis A Outbreaks Associated with Person-to-Person Transmission - United States, 2016-2020" (2022) in MMWR Morbidity and Mortality Weekly Report
  • "Accurate spatiotemporal mapping of drug overdose deaths by machine learning of drug-related web-searches" (2020) in PLoS ONE
  • "A Phylogenetic Analysis of Hepatitis C Virus Transmission, Relapse, and Reinfection Among People Who Inject Drugs Receiving Opioid Agonist Therapy" (2020) in The Journal of Infectious Diseases
  • "Quantitative differences between intra-host HCV populations from persons with recently established and persistent infections" (2020) in Virus Evolution
  • "SOPHIE: Viral outbreak investigation and transmission history reconstruction in a joint phylogenetic and network theory framework" (2022) in Cell Systems

The main publication venues where Khudyakov has contributed multiple works include:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • PLoS ONE
  • Emerging infectious diseases
  • Journal of Computational Biology
  • BMC Bioinformatics

Frequent co-authors in Khudyakov's research network are:

  • Sumathi Ramachandran
  • Pavel Skums
  • David S. Campo
  • Lilia Ganova-Raeva
  • Pelin Icer Baykal

Their research combines epidemiological methods with computational biology and molecular techniques, targeting viral hepatitis as well as related infectious and liver diseases. The focus on machine learning approaches and phylogenetic analyses demonstrates an integration of advanced bioinformatics tools in public health research.

Best Publications

  • HIV Infection Linked to Injection Use of Oxymorphone in Indiana, 2014-2015.

    Philip J. Peters;Pamela Pontones;Karen W. Hoover;Monita R. Patel

  • Identification and characterization of the neutralization epitope(s) of the hepatitis E virus

    Jihong Meng;Xing Dai;Xing Dai;Joy C. Chang;Elena Lopareva

  • Hepatitis A virus: host interactions, molecular epidemiology and evolution

    Gilberto Vaughan;Livia Maria Goncalves Rossi;Joseph C. Forbi;Vanessa S. de Paula

  • Serological diagnostics of hepatitis E virus infection

    Yury Khudyakov;Saleem Kamili

  • Detection and characterisation of swine hepatitis E virus in New Zealand.

    Olga Garkavenko;Anna Obriadina;Jihong Meng;David A. Anderson

  • PATRIC: The VBI PathoSystems Resource Integration Center

    E. E. Snyder;N. Kampanya;J. Lu;E. K. Nordberg

  • Outbreak of hepatitis A in the USA associated with frozen pomegranate arils imported from Turkey: an epidemiological case study

    Melissa G Collier;Yury E Khudyakov;David Selvage;Meg Adams-Cameron

  • Evolutionary History and Population Dynamics of Hepatitis E Virus

    Michael A. Purdy;Yury E. Khudyakov

  • Epidemic history and evolutionary dynamics of hepatitis B virus infection in two remote communities in rural Nigeria.

    Joseph C. Forbi;Gilberto Vaughan;Michael A. Purdy;David S. Campo

  • The Evolving Epidemiology of Hepatitis A in the United States: Incidence and Molecular Epidemiology From Population-Based Surveillance, 2005-2007

    R. Monina Klevens;Jeremy T. Miller;Kashif Iqbal;Ann Thomas

  • The molecular epidemiology of hepatitis E virus infection.

    Michael A. Purdy;Yury E. Khudyakov

  • Hepatitis C Virus Infections from Unsafe Injection Practices at an Endoscopy Clinic in Las Vegas, Nevada, 2007–2008

    Gayle E. Fischer;Melissa K. Schaefer;Brian J. Labus;Lawrence Sands

  • Spatial Configuration of Hepatitis E Virus Antigenic Domain

    Li Xing;Li Xing;Joseph C. Wang;Tian Cheng Li;Yasuhiro Yasutomi

  • A Novel Hepacivirus with an Unusually Long and Intrinsically Disordered NS5A Protein in a Wild Old World Primate

    Michael Lauck;Samuel D. Sibley;James Lara;Michael A. Purdy

  • Molecular Confirmation of Oysters as the Vector for Hepatitis A in a 2005 Multistate Outbreak

    Y. C. Shieh;Y. E. Khudyakov;G. Xia;L. M. Ganova-Raeva

  • Epitope Mapping in Proteins of Hepatitis E Virus

    Y.E. Khudyakov;N.S. Khudyakova;H.A. Fields;D. Jue

  • The hepatitis E virus polyproline region is involved in viral adaptation.

    Michael A. Purdy;James Lara;Yury E. Khudyakov

  • Efficient error correction for next-generation sequencing of viral amplicons

    Pavel Skums;Zoya Dimitrova;David S Campo;Gilberto Vaughan

  • Sequence heterogeneity of TT virus and closely related viruses.

    Yury E. Khudyakov;Mian Er Cong;Barbara Nichols;Deoine Reed

  • Temporal Variations in the Hepatitis C Virus Intrahost Population during Chronic Infection

    Sumathi Ramachandran;David S. Campo;Zoya E. Dimitrova;Guo-liang Xia

  • IgM and IgG antibodies to hepatitis E virus (HEV) detected by an enzyme immunoassay based on an HEV‐specific artificial recombinant mosaic protein

    M. O. Favorov;Y. E. Khudyakov;E. E. Mast;T. L. Yashina

Frequent Co-Authors

Alexander Zelikovsky
Alexander Zelikovsky Georgia State University
Michael A. Purdy
Michael A. Purdy Centers for Disease Control and Prevention
Howard A. Fields
Howard A. Fields Centers for Disease Control and Prevention
William M. Switzer
William M. Switzer Centers for Disease Control and Prevention
Leonid A. Bunimovich
Leonid A. Bunimovich Georgia Institute of Technology
Michael Roggendorf
Michael Roggendorf Technical University of Munich
Mel Krajden
Mel Krajden University of British Columbia
Julio S. G. Montaner
Julio S. G. Montaner University of British Columbia
Scott D. Holmberg
Scott D. Holmberg Centers for Disease Control and Prevention
William M. Lee
William M. Lee The University of Texas Southwestern Medical Center

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