D-Index & Metrics Best Publications

D-Index & Metrics D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines.

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Biology and Biochemistry D-index 64 Citations 14,287 229 World Ranking 4281 National Ranking 86

Overview

What is he best known for?

The fields of study he is best known for:

  • Gene
  • Cancer
  • Genetics

Genetics, Computational biology, Cancer, Gene and Genetic diversity are his primary areas of study. His Computational biology study combines topics from a wide range of disciplines, such as Pyrosequencing, Evolutionary dynamics, Single cell sequencing, Quasispecies model and Hidden Markov model. Niko Beerenwinkel combines subjects such as Mutation and Cancer research with his study of Cancer.

The concepts of his Cancer research study are interwoven with issues in Cell, Benign tumor, Stem cell, CA15-3 and Colorectal cancer. His Gene study frequently draws connections to other fields, such as Drug resistance. His Metastasis study incorporates themes from Immunology and Point mutation.

His most cited work include:

  • ROCR: visualizing classifier performance in R (2078 citations)
  • Comparative lesion sequencing provides insights into tumor evolution (621 citations)
  • Comparative lesion sequencing provides insights into tumor evolution (621 citations)

What are the main themes of his work throughout his whole career to date?

His primary areas of investigation include Computational biology, Genetics, Gene, Cancer and Mutation. His research on Computational biology also deals with topics like

  • Genomics which connect with Somatic evolution in cancer,
  • Inference and related Data mining. As part of his studies on Genetics, Niko Beerenwinkel often connects relevant areas like Genetic diversity.

His Cancer research is multidisciplinary, incorporating perspectives in Mutation and Cancer research. His Mutation research integrates issues from Tree, Cell and Sequencing data. His Virology research is multidisciplinary, relying on both Transcriptome and Drug resistance.

He most often published in these fields:

  • Computational biology (49.14%)
  • Genetics (30.81%)
  • Gene (27.63%)

What were the highlights of his more recent work (between 2019-2021)?

  • Computational biology (49.14%)
  • Cancer (24.21%)
  • Mutation (14.43%)

In recent papers he was focusing on the following fields of study:

Niko Beerenwinkel mostly deals with Computational biology, Cancer, Mutation, Gene and Somatic evolution in cancer. His Computational biology research incorporates themes from Profiling, Cell, DNA sequencing and Genomics. His biological study spans a wide range of topics, including Cancer research, Clear cell renal cell carcinoma and Oncology.

His Mutation research also works with subjects such as

  • Non parametric clustering which connect with Treatment resistance and Tumor initiation,
  • Bayesian probability together with Sampling and Data mining. His Gene study frequently intersects with other fields, such as Inference. His research in Somatic evolution in cancer intersects with topics in Haematopoiesis, Carcinogenesis, Point mutation, Evolutionary dynamics and Myeloid leukemia.

Between 2019 and 2021, his most popular works were:

  • Eleven grand challenges in single-cell data science (187 citations)
  • Eleven grand challenges in single-cell data science (187 citations)
  • Clonal evolution of acute myeloid leukemia revealed by high-throughput single-cell genomics. (28 citations)

In his most recent research, the most cited papers focused on:

  • Gene
  • Cancer
  • Statistics

His main research concerns Computational biology, Severe acute respiratory syndrome coronavirus 2, Somatic evolution in cancer, Genomics and Coronavirus disease 2019. The study incorporates disciplines such as Cancer cell, Cancer, Cell culture, Clear cell renal cell carcinoma and Genetic screen in addition to Computational biology. The various areas that Niko Beerenwinkel examines in his Somatic evolution in cancer study include Hematopoietic stem cell transplantation, Myeloid, Myeloid leukemia, Immunology and DNA sequencing.

His Myeloid leukemia research is multidisciplinary, incorporating perspectives in Clonal selection, KRAS and Genetics. His research in Genomics intersects with topics in Clinical decision support system, Mutation, Treatment response, Omics and Profiling. His Evolutionary biology research is multidisciplinary, relying on both Genetic diversity, Virus, Gene, Pandemic and Coronavirus.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

ROCR: visualizing classifier performance in R

Tobias Sing;Oliver Sander;Niko Beerenwinkel;Thomas Lengauer.
Bioinformatics (2005)

3220 Citations

Comparative lesion sequencing provides insights into tumor evolution

Siân Jones;Wei Dong Chen;Wei Dong Chen;Giovanni Parmigiani;Frank Diehl.
Proceedings of the National Academy of Sciences of the United States of America (2008)

820 Citations

Eleven grand challenges in single-cell data science

David Lähnemann;David Lähnemann;Johannes Köster;Johannes Köster;Ewa Szczurek;Davis J. McCarthy;Davis J. McCarthy.
Genome Biology (2020)

477 Citations

Genetic progression and the waiting time to cancer

Niko Beerenwinkel;Tibor Antal;David Dingli;Arne Traulsen.
PLOS Computational Biology (2007)

448 Citations

Geno2pheno: estimating phenotypic drug resistance from HIV-1 genotypes

Niko Beerenwinkel;Martin Däumer;Mark Oette;Klaus Korn.
Nucleic Acids Research (2003)

331 Citations

Neutrophils escort circulating tumour cells to enable cell cycle progression

Barbara Maria Szczerba;Francesc Castro-Giner;Francesc Castro-Giner;Marcus Vetter;Ilona Krol.
Nature (2019)

329 Citations

ShoRAH: estimating the genetic diversity of a mixed sample from next-generation sequencing data

Osvaldo Zagordi;Osvaldo Zagordi;Arnab Bhattacharya;Nicholas Eriksson;Niko Beerenwinkel;Niko Beerenwinkel.
BMC Bioinformatics (2011)

276 Citations

Diversity and complexity of HIV-1 drug resistance: a bioinformatics approach to predicting phenotype from genotype

Niko Beerenwinkel;Barbara Schmidt;Hauke Walter;Rolf Kaiser.
Proceedings of the National Academy of Sciences of the United States of America (2002)

276 Citations

Viral Population Estimation Using Pyrosequencing

Nicholas Eriksson;Lior Pachter;Yumi Mitsuya;Soo-Yon Rhee.
PLOS Computational Biology (2008)

273 Citations

Cancer Evolution: Mathematical Models and Computational Inference

Niko Beerenwinkel;Niko Beerenwinkel;Roland F. Schwarz;Moritz Gerstung;Florian Markowetz.
Systematic Biology (2015)

272 Citations

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