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Genetics

D-Index
107
Citations
302963
World Ranking
569
National Ranking
283

Molecular Biology

D-Index
107
Citations
302963
World Ranking
403
National Ranking
231

Research.com Recognitions

  • 2009 - Fellow of the International Society for Computational Biology

Overview

Webb Miller is affiliated with Pennsylvania State University in the United States. Their research spans multiple fields, predominantly within Biochemistry, Genetics and Molecular Biology, Agricultural and Biological Sciences, and Environmental Science. The scientist's work contributes to both foundational and applied aspects of molecular and ecological studies.

Their recent publications cover a variety of topics related to genomics, molecular biology, and marine ecosystems. Recent papers include:

  • Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution (2021), published in Kent Academic Repository (University of Kent)
  • STAGdb: a 30K SNP genotyping array and Science Gateway for Acropora corals and their dinoflagellate symbionts (2020), published in Scientific Reports
  • STAGdb: a 30K SNP genotyping array and Science Gateway for Acropora corals and their dinoflagellate symbionts (2020), published in bioRxiv (Cold Spring Harbor Laboratory)
  • Author Correction: Comparative and demographic analysis of orang-utan genomes (2022), published in Nature

The main topics covered in their work include chromosomal and genetic variations, genomics and phylogenetic studies, coral and marine ecosystems studies, and marine and coastal plant biology. Additional topics addressed are RNA and protein synthesis mechanisms, crustacean biology and ecology, and marine sponges and natural products.

Their research touches on the following subfields:

  • Molecular Biology
  • Ecology
  • Plant Science
  • Oceanography
  • Biotechnology

Frequent co-authors in their publications include LaDeana W. Hillier, Wesley C. Warren, Chris P. Ponting, Asif Chinwalla, and Catrina C. Fronick. These collaborators have contributed to shared research efforts across several studies.

The venues where Webb Miller publishes regularly include Kent Academic Repository (University of Kent), Scientific Reports, bioRxiv (Cold Spring Harbor Laboratory), and Nature. These publication venues reflect a focus on both high-impact journal articles and repositories for preprints or institutional archives.

Best Publications

  • Basic Local Alignment Search Tool

    Stephen F. Altschul;Warren Gish;Webb C. Miller;Eugene W. Myers

  • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

    Stephen F. Altschul;Thomas L. Madden;Alejandro A. Schäffer;Jinghui Zhang

  • Initial sequencing and comparative analysis of the mouse genome.

    Robert H. Waterston;Kerstin Lindblad-Toh;Ewan Birney;Jane Rogers

  • A greedy algorithm for aligning DNA sequences.

    Zheng Zhang;Scott Schwartz;Lukas Wagner;Webb Miller

  • Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

    Ewan Birney;John A. Stamatoyannopoulos;Anindya Dutta;Roderic Guigó

  • Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

    Adam Siepel;Gill Bejerano;Jakob Skou Pedersen;Angie S Hinrichs

  • Aligning Multiple Genomic Sequences With the Threaded Blockset Aligner

    Mathieu Blanchette;W. James Kent;Cathy Riemer;Laura Elnitski

  • Human–Mouse Alignments with BLASTZ

    Scott Schwartz;W. James Kent;Arian Smit;Zheng Zhang

  • The ENCODE (ENCyclopedia of DNA elements) Project

    E. A. Feingold;P. J. Good;M. S. Guyer;S. Kamholz

  • Basic local alignment search tool. Journal of Molecular Biology

    SF Altschul;W Gish;W Miller;EW Myers

  • An integrated encyclopedia of DNA elements in the human genome

    Ian Dunham;Anshul Kundaje;Shelley F. Aldred;Patrick J. Collins

  • Evolution's cauldron: Duplication, deletion, and rearrangement in the mouse and human genomes

    W. James Kent;Robert Baertsch;Angie Hinrichs;Webb Miller

  • Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

    Ladeana W. Hillier;Webb Miller;Ewan Birney;Wesley Warren

  • Genome sequence of the Brown Norway rat yields insights into mammalian evolution

    Richard A. Gibbs;George M. Weinstock;Michael L. Metzker;Donna M. Muzny

  • Galaxy: A platform for interactive large-scale genome analysis

    Belinda Giardine;Cathy Riemer;Ross C. Hardison;Richard Burhans

  • Complete genome sequence of Salmonella enterica serovar Typhimurium LT2

    Michael McClelland;Kenneth E. Sanderson;John Spieth;Sandra W. Clifton

  • Optimal alignments in linear space.

    Eugene W. Myers;Webb Miller

  • Scoring pairwise genomic sequence alignments.

    Francesca Chiaromonte;V. B. Yap;W. Miller

  • A User's Guide to the Encyclopedia of DNA Elements (ENCODE)

    Richard M. Myers;John Stamatoyannopoulos;Michael Snyder;Ian Dunham

  • Evolutionary and biomedical insights from the rhesus macaque genome

    Richard A. Gibbs;Jeffrey Rogers

Frequent Co-Authors

Ross C. Hardison
Ross C. Hardison Pennsylvania State University
Stephan C. Schuster
Stephan C. Schuster Nanyang Technological University
David Haussler
David Haussler University of California, Santa Cruz
Eric D. Green
Eric D. Green National Institutes of Health
Ewan Birney
Ewan Birney European Molecular Biology Laboratory
Adam Siepel
Adam Siepel Cold Spring Harbor Laboratory
W. James Kent
W. James Kent University of California, Santa Cruz
Richard K. Wilson
Richard K. Wilson Nationwide Children's Hospital
Richard A. Gibbs
Richard A. Gibbs Baylor College of Medicine
Evan E. Eichler
Evan E. Eichler University of Washington

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