D-Index & Metrics Best Publications

D-Index & Metrics

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Genetics and Molecular Biology D-index 100 Citations 70,385 499 World Ranking 425 National Ranking 250

Research.com Recognitions

Awards & Achievements

2020 - Fellow of the American Association for the Advancement of Science (AAAS)

Overview

What is he best known for?

The fields of study he is best known for:

  • Bacteria
  • Gene
  • Genome

His main research concerns Genome, Genetics, Gene, Metagenomics and Whole genome sequencing. His Genome study combines topics from a wide range of disciplines, such as Phylogenetics, Computational biology and Microbiology. Jonathan A. Eisen interconnects Sequence analysis and Virulence in the investigation of issues within Microbiology.

His Metagenomics study combines topics in areas such as Microbiome, Ecology, Shotgun sequencing and Data science. His work carried out in the field of Ecology brings together such families of science as Proteobacteria, Phylum and Archaea. His study brings together the fields of Hydrogenase and Whole genome sequencing.

His most cited work include:

  • Genome sequence of the human malaria parasite Plasmodium falciparum (3623 citations)
  • Environmental Genome Shotgun Sequencing of the Sargasso Sea (3489 citations)
  • The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific (1647 citations)

What are the main themes of his work throughout his whole career to date?

His scientific interests lie mostly in Genome, Genetics, Whole genome sequencing, Gene and Type species. His Genome research focuses on Computational biology and how it relates to Metagenomics. His work in Phylogenetic tree, Plasmid, Chromosome, Genome project and Phylogenetics is related to Genetics.

His research on Phylogenetics often connects related areas such as Genomics. His Whole genome sequencing research also works with subjects such as

  • Microbiology and related Virulence,
  • Strain and related Contig. Gene is a component of his RNA, Flavobacteriaceae, Sequence, Primary nutritional groups and Bacteroidetes studies.

He most often published in these fields:

  • Genome (113.69%)
  • Genetics (111.96%)
  • Whole genome sequencing (99.42%)

What were the highlights of his more recent work (between 2015-2021)?

  • Genome (113.69%)
  • Ecology (8.36%)
  • Microbiome (5.33%)

In recent papers he was focusing on the following fields of study:

His primary areas of investigation include Genome, Ecology, Microbiome, Microbiology and Botany. Genetics and Gene are the focus of his Genome studies. His work on Whole genome sequencing and Bacterial genetics as part of his general Genetics study is frequently connected to ATP-binding cassette transporter and Sequence assembly, thereby bridging the divide between different branches of science.

His work investigates the relationship between Gene and topics such as Bacteria that intersect with problems in Prionailurus bengalensis. His work focuses on many connections between Ecology and other disciplines, such as Microbial mat, that overlap with his field of interest in Diatom. His Microbiology study which covers Virulence that intersects with Antibiotic resistance and Outbreak.

Between 2015 and 2021, his most popular works were:

  • Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (512 citations)
  • Research priorities for harnessing plant microbiomes in sustainable agriculture. (308 citations)
  • 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life (140 citations)

In his most recent research, the most cited papers focused on:

  • Bacteria
  • Gene
  • Genome

The scientist’s investigation covers issues in Microbiome, Genome, Metagenomics, Ecology and Archaea. His Microbiome study combines topics in areas such as Coral reef, Feces, Anas, Host and Operational taxonomic unit. Genetics and Gene are the main areas of his Genome studies.

His Metagenomics research incorporates elements of Evolutionary biology, Context, Environmental resource management, Food processing and Computational biology. The study incorporates disciplines such as Cyanobacteria and Phototroph in addition to Ecology. His Archaea research includes elements of Phylogenetic diversity, Phylogenetic tree and Library science.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

Environmental Genome Shotgun Sequencing of the Sargasso Sea

J. Craig Venter;Karin Remington;John F. Heidelberg;Aaron L. Halpern.
Science (2004)

4884 Citations

Genome sequence of the human malaria parasite Plasmodium falciparum

Malcolm J. Gardner;Neil Hall;Eula Fung;Owen White.
Nature (2002)

4742 Citations

The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific

Douglas B. Rusch;Aaron L Halpern;Granger Sutton;Karla B. Heidelberg;Karla B. Heidelberg.
PLOS Biology (2007)

2134 Citations

DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae

John F. Heidelberg;Jonathan A. Eisen;William C. Nelson;Rebecca A. Clayton.
Nature (2000)

2006 Citations

Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima

Karen E. Nelson;Rebecca A. Clayton;Steven R. Gill;Michelle L. Gwinn.
Nature (1999)

1755 Citations

Insights into the phylogeny and coding potential of microbial dark matter

Christian Rinke;Patrick Schwientek;Alexander Sczyrba;Alexander Sczyrba;Natalia N. Ivanova.
Nature (2013)

1716 Citations

Complete Genome Sequence of a Virulent Isolate of Streptococcus pneumoniae

H. Tettelin;K. E. Nelson;I. T. Paulsen;Jonathan A Eisen.
Science (2001)

1530 Citations

Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440

K. E. Nelson;C. Weinel;I. T. Paulsen;R. J. Dodson.
Environmental Microbiology (2002)

1493 Citations

Complete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58

Hervé Tettelin;Nigel J. Saunders;John Heidelberg;Alex C. Jeffries.
Science (2000)

1327 Citations

Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1.

O. White;J. A. Eisen;J. F. Heidelberg;E. K. Hickey.
Science (1999)

1295 Citations

Best Scientists Citing Jonathan A. Eisen

Nikos C. Kyrpides

Nikos C. Kyrpides

Joint Genome Institute

Publications: 216

Jizhong Zhou

Jizhong Zhou

University of Oklahoma

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Tanja Woyke

Tanja Woyke

Joint Genome Institute

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Hans-Peter Klenk

Hans-Peter Klenk

Newcastle University

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Jillian F. Banfield

Jillian F. Banfield

University of California, Berkeley

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Jack A. Gilbert

Jack A. Gilbert

University of California, San Diego

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Didier Raoult

Didier Raoult

Aix-Marseille University

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Natalia Ivanova

Natalia Ivanova

Lawrence Berkeley National Laboratory

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Derek R. Lovley

Derek R. Lovley

University of Massachusetts Amherst

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Rob Knight

Rob Knight

University of California, San Diego

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Adam P. Arkin

Adam P. Arkin

Lawrence Berkeley National Laboratory

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Alla Lapidus

Alla Lapidus

St Petersburg University

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Rino Rappuoli

Rino Rappuoli

Imperial College London

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Donald A. Bryant

Donald A. Bryant

Pennsylvania State University

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Eugene V. Koonin

Eugene V. Koonin

National Institutes of Health

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Susannah G. Tringe

Susannah G. Tringe

Joint Genome Institute

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Profile was last updated on December 6th, 2021.
Research.com Ranking is based on data retrieved from the Microsoft Academic Graph (MAG).
The ranking d-index is inferred from publications deemed to belong to the considered discipline.

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